Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g1704 ATGGGGTCCATGGCTAAATTTCTAATGGCTTCTTTACTTCTTCTTCTTCCTTGTGTCTTCATCAATGCTAAGAAAACAACCTACATTGTTCATATGAAGCATCATGCTTTGCCTTCTGACTATCCCACCCATCTCCAATCTCTATCTTCAACTGCCTCTGATTCACTTCTTTACACATACACATCTGCCTATCATGGCTTTGCTGCATCTCTTGATCCAGATGAAGCCGAATTGCTCCGCCAATCGGATTCAGTTCTCGGTGTCTATGAAGACACTGTCTACAATCTCCACACCACTCGGACTCCCGGATTCCTCGGTCTCGACTCCGATTTCGGCTTGTGGGAAGGCCACAACACTCAGGATCTAGACCAGGCTTCTCACGATGTCATCATTGGGGTTCTAGACACTGGGATTTGGCCAGAGTCCAAGAGCTTCGATGACGTGGGAATGCCGGAAATCCCATCGCGGTGGCGTGGCGAATGCGAATCAGGGCCAGATTTCAGCCCTTCACTCTGCAACAAGAAACTAATTGGAGCTCGCAGCTTCTCCAAAGGTTATCAGATGGCATCTGGTGGTGGGTACTTCAAGAAACCGAGAGAGGATCAGTCGGCTCGAGATCAGGACGGGCACGGGACTCACACGGCAAGCACGGCTGCTGGATCACATGTGGCTAATGCGAGCTTACTTGGATATGCTAGAGGGATTGCTCGTGGGATGGCTCCTCAAGCTAGAGTTGCAGCTTACAAGACCTGTTGGCCTACTGGTTGCTTTGGATCTGATATTTTAGCTGCTATGGATCGGGCTATATTGGATGGGGTCGATGTACTTTCACTCTCATTGGGTGGCGGCTCTGCACCGTATTACAAAGATACAATTGCAATTGGAGCATTTGCAGCAATGGAGAAAGGGGTGTTTGTTTCGTGTTCAGCTGGGAACAGTGGCCCAAACAAGGCCTCTTTGGCTAATGTGGCACCGTGGATCATGACGGTTGGAGCTGGAACTCTGGACCGCGACTTCCCGGCTTATGTCGATCTCGGAAATGGTCGGCGAATCACTGGAGTGTCTCTCTACAGTGGCCAAGGAATGGGGAGCAAACCGGTGGGTTTGGTGTACAATAAAGGAAGTAATTCCTCGAGCAATGTATGCTTGCCCGGTTCTCTGGAACCGGCGTTGGTTAGAGGGAAGGTGGTGATTTGTGACAGAGGAGTCAATGCTAGAGTGGAGAAGGGTGGGGTGGTTAGAGATGCCGGTGGGATTGGGATGATTTTGGCTAATACGGCTGCTAGTGGGGAGGAATTGGTGGCTGACAGCCACTTGCTGCCGGCCGTCGCGGTGGGGAGGAAAGTCGGCGACTTGATCCGGCAGTATGTGCGGTCAGTTTCGAAGCCGATGGCGGCGTTGAGCTTTGGTGGGACAATTTTGAACGTGCGCCCATCTCCGGTGGTGGCTGCGTTTAGCTCTAGAGGACCCAACTTGGTAACTCCCCAAATCCTAAAGCCAGATGTTATTGGCCCTGGCGTTAACATTTTGGCTGCCTGGTCTGAGTCCGTTGGGCCTACAGGATTGGACAGTGACAAGAGGAAAACTCAGTTCAATATAATGTCAGGAACATCCATGTCTTGCCCACATATAAGTGGGTTGGCAGCATTGCTGAAGGCAGCTCATTCAGAATGGAGTCCAAGTGCTATCAAATCTGCGTTGATGACCACTGCATACACGCAGGACAACACCAACTCATCTCTCCGAGATGCTGCCGGAGGGGCGTTTTCCAACCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCCCTCTCCCCCGGTCTTGTATATGATATTTCAACAGATGACTACATTGACTTCTTGTGCTCCTTGGACTACGGGATCGATCATGTTAAGGCAATCGTGAAGCGTTCGAACATAACCTGCTCAAGAAAGTTTGCTGATCCAGGACAACTTAACTACCCTTCATTTTCAGTAGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGCAAAGTCACGAATGTTGGGGCTGCAGGTTCCGTTTATGAAGTGTCTACTACTGCTCCATCAGTTGTGAATGTGATCGTGAAACCCTCAAAGCTTGTGTTCACTAAAGTTGGGGAAAGGAAAAGGTATACTATTACATTTGTGGCAAGCAGGGACGCTGCTCGAACCACGAAATTTGGGTTTGGATCAATTGCCTGGACGAATGAACAGCACCAAGTCAAAAGCCCAGTGGCTTTCGCCTGGACAAGGTTGTGA 2271 50.15 MGSMAKFLMASLLLLLPCVFINAKKTTYIVHMKHHALPSDYPTHLQSLSSTASDSLLYTYTSAYHGFAASLDPDEAELLRQSDSVLGVYEDTVYNLHTTRTPGFLGLDSDFGLWEGHNTQDLDQASHDVIIGVLDTGIWPESKSFDDVGMPEIPSRWRGECESGPDFSPSLCNKKLIGARSFSKGYQMASGGGYFKKPREDQSARDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAAMDRAILDGVDVLSLSLGGGSAPYYKDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVDLGNGRRITGVSLYSGQGMGSKPVGLVYNKGSNSSSNVCLPGSLEPALVRGKVVICDRGVNARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKVGDLIRQYVRSVSKPMAALSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESVGPTGLDSDKRKTQFNIMSGTSMSCPHISGLAALLKAAHSEWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLVYDISTDDYIDFLCSLDYGIDHVKAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRKVTNVGAAGSVYEVSTTAPSVVNVIVKPSKLVFTKVGERKRYTITFVASRDAARTTKFGFGSIAWTNEQHQVKSPVAFAWTRL 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28243348 28246654 - Sed0015954.1 Sed12g1704 732660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g1704 756 Gene3D Peptidase S8/S53 domain 128 619 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed12g1704 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 97 IPR037045 -
Sed12g1704 756 SUPERFAMILY Protease propeptides/inhibitors 26 96 - -
Sed12g1704 756 Pfam Subtilase family 127 576 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed12g1704 756 SUPERFAMILY Subtilisin-like 96 610 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed12g1704 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 749 IPR045051 -
Sed12g1704 756 FunFam Subtilisin-like protease SBT1.5 128 348 - -
Sed12g1704 756 FunFam Subtilisin-like protease SBT1.5 623 754 - -
Sed12g1704 756 FunFam subtilisin-like protease SBT1.5 336 474 - -
Sed12g1704 756 Gene3D - 623 753 - -
Sed12g1704 756 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Sed12g1704 756 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Sed12g1704 756 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Sed12g1704 756 Pfam PA domain 378 452 IPR003137 -
Sed12g1704 756 CDD PA_subtilisin_like 342 465 - -
Sed12g1704 756 Pfam Fibronectin type-III domain 653 750 IPR041469 -
Sed12g1704 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Sed12g1704 756 CDD Peptidases_S8_3 94 572 IPR034197 -
Sed12g1704 756 Pfam Peptidase inhibitor I9 27 97 IPR010259 -
Sed12g1704 756 Gene3D - 336 474 - -
Sed12g1704 756 ProSiteProfiles Serine proteases, subtilase domain profile. 110 606 - -
Sed12g1704 756 MobiDBLite consensus disorder prediction 191 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g0192 Sed-Chr6:1399926 Sed12g1704 Sed-Chr12:28243348 1.40E-199 dispersed
Sed08g0923 Sed-Chr8:7816080 Sed12g1704 Sed-Chr12:28243348 0.00E+00 dispersed
Sed10g0690 Sed-Chr10:4821375 Sed12g1704 Sed-Chr12:28243348 5.90E-230 dispersed
Sed10g1210 Sed-Chr10:24900007 Sed12g1704 Sed-Chr12:28243348 5.80E-217 dispersed
Sed11g1173 Sed-Chr11:27638466 Sed12g1704 Sed-Chr12:28243348 2.30E-141 dispersed
Sed12g1704 Sed-Chr12:28243348 Sed13g0205 Sed-Chr13:1331968 5.10E-210 dispersed
Sed12g1704 Sed-Chr12:28243348 Sed08g0922 Sed-Chr8:7816080 0.00E+00 wgd
Sed12g1704 Sed-Chr12:28243348 Sed09g1653 Sed-Chr9:39951696 8.50E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g1704 - - - 0.0