Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g2057 ATGCAGGGAGCTACAATCCCTCGGAAATGCTGCTTGGATCGTCGCCGTCTAGTCGAATTGCGGGTGGAGAGATGGAATTCCCCGAATCCGGTTCCGTCTCGCTTCGGCGGAGTGGCTCGGGGAAGTTGGCCTCTAGCTGTCCCGGCGTTGGATTTCATATGGCGGCTAAGCCGGTGGATAATTTGCAGACAATGGCTGCCAATAGTGTTAGGACTGTGGGAACTAGCAAGCCGGCTGGAGTGGCAGACGGGAGGAGCATCTGCAGAGGCCAAATATCCTCCTCCTGCAAATTCAAAATCCTTGAAGGAAAAAACTACGAAGGCCGAAAGGCGGGCTTTGCAGGAGGCTCAGCGAGCTGCAAAAATTTCTGCAAAAGGTGAAGCAAATAAGTCAGGTCCTGCCTCTGGGGCAACAGCTGGTAAAGTTAGGAAACAGCCTTCAACAGTTAAAGGTGGTCCTGCCACACCTTTGGTTGCCTCTGCTGACAATCGAGGAGGTGATCGTATTGCTGATAAAGAAAGGAAGAAAGATGTTCCCCCTCCACGAATGCAATTTGATGACAAACATCGCGTAGAAAGGGCTAAAAAGCGAGCCGTGTTTAATCAAACTGAGGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGGACTCAACTTCTTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATACATGGCTGGAGATATATCTGGCGGTAATGCTCGCTGTATTGCAATGCTCCATGCATTCCAGCAAGCCATTAAAGACTACTCAACCCCGCCACAGAAATCTCTCGTTCGAGATTTAACTGCAAAAATTGGCGTCTATGTGTCGTTCTTTAATGAATGCAGGCCACTGTCGGTCAGCATGGGTAATGCAATCAGATTTTTGAAAAACCGCATTGCCAATTTACCACCAAGTCTTCTAGAGTCTGAGGCAAAAGCTACACTTTCCTTGGATATCAGTCGTTTTATCAATGAGAAGATCATGATTGCTGACGAGGTCATAGTTAGGCACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCATCATGTGTTGTAGAGATGCTTCTATTGTATGCCCACGATCTTGGTAAACAATTTCGTGTCGTGGTGGTTGATTCTCGACCAAAACTCGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAACGGCTTAAGTTGTACTTACACTCATATAAATGCTATTTCCTACGTGATGCGCGAAGTAAATCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCTAATGGAACTGTATATTCAAGAGTGGGGACTGCAAGTATTGCCATGGTTGCAGATGCATTTCATGTTCCAGTATTGTTCTGCTGTGAAGCATATAAATTTCACGAAAGGGTTCAACTTGATTCAATATGCTTTAATGAATTAGGTGACCCAGATGCTATCTCAAAGGTTTCAGGAAGGACTGACATCAATTATCTAGACAGTTTGACTTCTAAAGATCATTTGCAACTTCTAAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCGCCAACAAGCGTGCCGGTGATTGTACGCGAGTATCGGAGAGAACACCTATGGGTATAA 1689 45.29 MQGATIPRKCCLDRRRLVELRVERWNSPNPVPSRFGGVARGSWPLAVPALDFIWRLSRWIICRQWLPIVLGLWELASRLEWQTGGASAEAKYPPPANSKSLKEKTTKAERRALQEAQRAAKISAKGEANKSGPASGATAGKVRKQPSTVKGGPATPLVASADNRGGDRIADKERKKDVPPPRMQFDDKHRVERAKKRAVFNQTEARNRVELFRHLPQYEQGTQLLDLVSKFFQLDTIHPAIYKVGLQYMAGDISGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIANLPPSLLESEAKATLSLDISRFINEKIMIADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIANGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTASIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDSLTSKDHLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWV 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 31363803 31370964 - Sed0000363.1 Sed12g2057 733013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g2057 562 MobiDBLite consensus disorder prediction 102 116 - -
Sed12g2057 562 SUPERFAMILY NagB/RpiA/CoA transferase-like 208 555 IPR037171 -
Sed12g2057 562 Pfam Initiation factor 2 subunit family 253 545 IPR000649 GO:0044237(InterPro)
Sed12g2057 562 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 95 559 - -
Sed12g2057 562 MobiDBLite consensus disorder prediction 165 185 - -
Sed12g2057 562 Gene3D - 348 555 IPR042529 -
Sed12g2057 562 MobiDBLite consensus disorder prediction 86 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed12g2054 Sed-Chr12:31346234 Sed12g2057 Sed-Chr12:31363803 3.30E-210 dispersed
Sed12g2055 Sed-Chr12:31346234 Sed12g2057 Sed-Chr12:31363803 4.10E-208 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g2057 K03680 - csv:101214144 766.533