Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed12g2342 | ATGGGCGCAACCATTCTCACCGATCTCGGGGCTGAGATTTTCATTCCGGTCTGCGCCGTTGTCGGAATCCTCTTCTCCTTAGTCCAGTGGTACTACGTCGCTCAGGTTAAGCTCTCCCCCGGCCGGGATTCCGCTCACAACAACGCCGCCGGTTCCAAGAATGGCTACTCCGATTACTTAATCGAGGAAGAAGAAGGCGTCAACGACCACAACGTTGTTATCAAGTGTGCTGAGATTCAGAACGCCATTTCCGAAGGTGCAACCTCTTTCCTTTTTACGGAGTACAAGTATGTCGGCATCTTTATGGTGTTGTTTGCAGGCTTGATTTTTGTATTCCTCGGTTCAGTGGAAAGTTTTAGTACCAAGCCTCAACCGTGCTCATATGACAAAACAAGGACTTGTAAGCCAGCTTTGGCGACGGCTATATTTAGCACTGTATCTTTTTTACTTGGTGCAGTTACCTCAGTAGTTTCTGGTTTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGGAAAGGGGTTGGAAAGGCGTTTATTATTGCTTTTAGGTCTGGTGCAGTCATGGGCTTCCTCCTTGCTGCCAATGGTCTCTTGGTTTTGTATATTACCATTAATCTCTTCAAAATATATTATGGTGATGATTGGGGTGGCCTTTTCGAGTCAATCACTGGTTACGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGGATCTATACCAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGCAAGGTGGAAAGGAACATTCCTGAAGATGACCCCAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGGGATATAGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCTTCCTGTGCAGCTCTTGTTGTTGCTTCTATCTCCTCTTTCGGCAACAACCATGAGTTGACACCAATGCTCTATCCTCTCCTCGTCAGTTCTATGGGTATCCTGATTTGCCTAATCACCACCTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAACCAGCGTTGAAGAAGCAACTCGTAATTTCCACTGTTCTTATGACCATTGGAATTGCAATTGTAACTTGGTTGGCTGTTCCATCATCATTCACCATTTTCAACTTTGGAACTCAAAAAGTTGTGCAAAGCTGGAAATTGTTCTTGTGTGTTGCTGTTGGTCTCTGGGCTGGGCTTATAATTGGATTTGTGACAGAGTACTACACGAGCAATGCGTACAGCCCTGTGCAAGATGTTGCTGGTTCTTGCCGAACTGGAGCTGCCACCAATGTCATTTTTGGGTTGGCATTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCGGCCAGCATTTTTGTGAGTTTCACCTTTGCTGCCATGTACGGCATTGCAGTAGCTGCCCTTGGAATGCTGAGTACCATAGCTACAGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCTGAGATGGCAGGCATGAGCCACAGAATTCGGGAGAGAACCGACGCCCTCGATGCTGCTGGAAACACCACTGCAGCCATTGGAAAGGGTTTTGCCATTGGTTCAGCCGCCCTTGTGTCTCTTGCCCTTTTCGGTGCCTTTGTTAGCCGTGCTGGTGTCACTTCTGTTGACGTCTTGACGCCCAAAGTTTTCATTGGTTTGATCGTGGGTGCTATGCTTCCATACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGTAGTGCAGCCCTTAAGATGGTTGAGGAGGTTCGAAGGCAATTCAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTACGCAACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCTGGTGCCCTTGTCATGTTGACGCCACTAATTGTCGGTATCCTATTCGGAGTTGAAACTCTTTCTGGTGTCCTTGCCGGATCCCTTGTTTCTGGTGTGCAGATTGCCATCTCTGCATCCAACACCGGAGGTGCCTGGGATAACGCCAAGAAGTACATCGAGGCTGGTGCCTCAGAGCATGCAAGAACCCTTGGCCCGAAAGGATCCGACCCACACAAAGCCGCTGTTATCGGTGACACAATCGGAGACCCGCTCAAGGATACATCAGGACCTTCTCTGAACATTCTGATCAAGTTGATGGCTGTGGAGTCCCTTGTGTTTGCTCCTTTCTTCGCCACCCACGGCGGTCTTCTCTTCAAGCTCTTCTAA | 2307 | 47.72 | MGATILTDLGAEIFIPVCAVVGILFSLVQWYYVAQVKLSPGRDSAHNNAAGSKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYKYVGIFMVLFAGLIFVFLGSVESFSTKPQPCSYDKTRTCKPALATAIFSTVSFLLGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFIIAFRSGAVMGFLLAANGLLVLYITINLFKIYYGDDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHELTPMLYPLLVSSMGILICLITTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGIAIVTWLAVPSSFTIFNFGTQKVVQSWKLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVAGSCRTGAATNVIFGLALGYKSVIIPIFAIAASIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVTSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKLF | 768 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 33387368 | 33392985 | - | Sed0015890.1 | Sed12g2342 | 733298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed12g2342 | 768 | Pfam | Inorganic H+ pyrophosphatase | 74 | 753 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed12g2342 | 768 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 11 | 763 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed12g2342 | 768 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 9 | 758 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed12g2342 | 768 | PIRSF | H+-PPtase | 11 | 766 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
Sed12g2342 | 768 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 7 | 766 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g1959 | Sed-Chr3:13592004 | Sed12g2342 | Sed-Chr12:33387368 | 0.00E+00 | dispersed | |
Sed04g2316 | Sed-Chr4:36809669 | Sed12g2342 | Sed-Chr12:33387368 | 8.90E-128 | transposed | |
Sed12g2342 | Sed-Chr12:33387368 | Sed08g0630 | Sed-Chr8:4396998 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed12g2342 | K23025 | - | csv:101222673 | 1404.42 |