Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed12g2432 ATGATCGGTTCATCAATTTCCTTCATCATCATCATCTTCATCTCCATCTCGTTTTTCCAATTCAAACCTTCTTCCGATCACACCGTATTCCAAACCCTAGCTCGAAACCACTCACCGGCCGATCCATTTCCGGCCAACAATCTCACCCACGGGAACCGAGGCTCGCGTAACAAGAACTACATTGTTCGATTCGTTCAGTACAGGGAGGCGAAGGAGCATCGGTTCTACCTCGAATCGCGGGTTCGATCGGGCGGCTGGGGATGGATCGAGAGGCGGAACGCTGCGTCGAAGTACCCGACCGATTTCGGATTGGTTTCGATTGAGGAATCGGTGAGAAGAGAGCTGATGGAGGAGATTGAGGAGTTGGAGCTTGTTAAGGATGTGAATGTAGATGCAAGCCATGCTAGAGGATTGGTAACCGAGGATGGAGGTAGAGTTGGGGCTTTTGTTGATGGGAAGAAGCGTCCGGGGAAGATTTTCTCATCCATGTCGTTTAACGAAGAGGGCGGGGAACGTTATTCGGCCGCGATTAGCAATGCCTCTAATCGATGGGGACGGCATCTTTCGATGCAGAGATCCCAAGTTACCTCATTATTTGGAGCAGACTCTCTTTGGTCAAAAGGGTATACTGGTTGCAAAGTCAAAATGGCTATATTCGATACAGGAATTCGTGCTAGTCACCCACATTTTAAGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCAGGTGGAGATGAAGAGTGTCTAGGATTTGCTCCAGATACAGAGATATATGCTTTTCGTGTGTTTACAGATGCACAGGTGTCATACACTTCATGGTTTCTCGATGCATTCAACTATGCAATTGCTACAAATATGGATGTCTTAAATTTAAGCATTGGTGGACCAGATTACTTGGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACGGCAAATAATATCATCATGGTTTCTGCTATTGGAAATGATGGACCACTTTATGGAACTTTAAACAACCCTGCAGATCAGAGTGATGTAATTGGTGTTGGTGGTATTGACTACAATGATCATATTGCTTCATTTTCGTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTTATGGTCGTGTGAAGCCTGATGTTGTTGCATATGGTCGGGAAATTATGGGGTCCAAAATTAGTACTGGGTGCAAAAGTTTATCTGGCACTAGTGTGGCGAGCCCTGTTGTTGCTGGTGTGGTATGTCTACTTGTTAGTGTCATCCCCGAAAGCCAGCGGAAGATTATTTTAAATCCAGCTAGTATGAAGCAAGCACTTGTTGAGGGAGCTGCTAAGCTTGCTGGTCCTAATTTGTACGAGCAAGGTGCTGGCAGAGTTAATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCCCGGGCAAGCATCTTCCCTAGTGTTCTTGACTATACAGATTGCCCTTATTCGTGGCCTTTCTGTCGCCAACCTCTTTATGCAGGTGCAATGCCGATTATCTTCAATGCTACTATTTTGAATGGGATGGGTGTAATTGGCTATGTTGAAAGTCAACCAACTTGGCATCCTTTGAATGATGAAGGAAATCTGTTAAGCATTCACTTCACTTATTCTCAAGTCATCTGGCCTTGGACTGGTTATATTGCACTTCACATGCAAATTAAGGAAGAAGGTGCACAGTTTTCTGGAGAAATTGAGGGTAATGTGACTCTAACAGTATACAGTCCATCTAGTGGAGAGAAGAATCGCCAGACTAGTACTTGTGTGCTGCAACTGAAGTTAAAAGTGGTTCCAACACCTCCAAGATCCAAACGAGTTTTATGGGATCAATTTCATAGTATCAAATATCCTCCTGGTTATATTCCGAGGGACTCTTTGGATGTACGCAACGACATTCTGGACTGGCATGGAGACCACCTTCATACGAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGATACTATGTTGAATCGCTTGGTTCGCCTCTTACATGCTTCGATGCTCGCCAATATGGGACACTTCTACTAGTGGATCTAGAAGACGAGTACTTCAAAGAGGAAATCGAAAAGCTGAGGGACGATGTTATGATTACTGGATTGGGATTGGCTGTGTTCTCTGAATGGTATAATGTAGAAACAATGGTAAAAATGAGGTTCTTTGATGATAACACAAGAAGCTGGTGGACTCCAGTTACTGGAGGTGCAAATATTCCTGCACTAAATGATCTCTTAGCCCCATTTGGTATTGCTTTCGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGCGAACAGAGTCGATATGCATCAGGAACAGATATTGTGAGGTTTCCACAAGGTGGTTATGTGCATAGTTTTCCTTTCGTTGATAGCTCAGAGAGTGGAGTGGCTCAGAGCATACTAACCTCTAGCATGAATAAGGCGGAGTTTCCGATTCTCGGTCTATTAGAGGCGGTAGAGGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTGGACAGCAGCCATATGGTTACAAATTGCTACTGGCTCCTGAAAAAAATATTAGATTTCACCAGTGGAAATATTAGAGATCCGGTGCTCTTCACCAAGTCTTCGAAACGAAATTCACCTCTGTATCTAGAAGATAACAAACTACCATCTCGTAGAAGCGATGTAAATTTCTCTACTTATTCTGCTGTTGTTGGAAAGGAATTGATATGCAGGAGCGATTCGAGGTTTGAAGTATGGGGGACCAAGGGATACAGTATACATGTCAGGGGAAGAAATAGAAGGTTGCCCGGATTTCCCGTATTTGACTTGGGAAGAGGCTTGAATTATTCTACTTCGACGAGACCTCCCAAGTTGACTTTAAAAGACCGAACCGATACGTACGCAAACCGATACTTAAGCTTATTCTACCGGGATGAGCCTGGCGCTCCTTTGATAGTTCCTAATCATTGGCTTGTTCCTGCTATAGTTGCATTGACAGGTCTTTTGCTCATTTTGAGTTTTTGGCGGATTAGACAGAAGCGTCGGCGGCGACGAAGAGGCTCGGGATCCGCACGTTTTCCCAATTTATAG 3129 43.78 MIGSSISFIIIIFISISFFQFKPSSDHTVFQTLARNHSPADPFPANNLTHGNRGSRNKNYIVRFVQYREAKEHRFYLESRVRSGGWGWIERRNAASKYPTDFGLVSIEESVRRELMEEIEELELVKDVNVDASHARGLVTEDGGRVGAFVDGKKRPGKIFSSMSFNEEGGERYSAAISNASNRWGRHLSMQRSQVTSLFGADSLWSKGYTGCKVKMAIFDTGIRASHPHFKNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSVIPESQRKIILNPASMKQALVEGAAKLAGPNLYEQGAGRVNLLESYEILKSYQPRASIFPSVLDYTDCPYSWPFCRQPLYAGAMPIIFNATILNGMGVIGYVESQPTWHPLNDEGNLLSIHFTYSQVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPSSGEKNRQTSTCVLQLKLKVVPTPPRSKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVESLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPQGGYVHSFPFVDSSESGVAQSILTSSMNKAEFPILGLLEAVEGRIAVYGDSNCLDSSHMVTNCYWLLKKILDFTSGNIRDPVLFTKSSKRNSPLYLEDNKLPSRRSDVNFSTYSAVVGKELICRSDSRFEVWGTKGYSIHVRGRNRRLPGFPVFDLGRGLNYSTSTRPPKLTLKDRTDTYANRYLSLFYRDEPGAPLIVPNHWLVPAIVALTGLLLILSFWRIRQKRRRRRRGSGSARFPNL 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 34013414 34020191 + Sed0019002.1 Sed12g2432 733388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed12g2432 1042 ProSiteProfiles Serine proteases, subtilase domain profile. 187 481 - -
Sed12g2432 1042 Pfam Subtilase family 213 468 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed12g2432 1042 CDD Peptidases_S8_SKI-1_like 205 461 IPR034185 -
Sed12g2432 1042 Gene3D Peptidase S8/S53 domain 188 479 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed12g2432 1042 ProSitePatterns Serine proteases, subtilase family, serine active site. 415 425 IPR023828 -
Sed12g2432 1042 SUPERFAMILY Subtilisin-like 196 483 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed12g2432 1042 ProSitePatterns Serine proteases, subtilase family, histidine active site. 251 261 IPR022398 -
Sed12g2432 1042 PRINTS Subtilisin serine protease family (S8) signature 247 260 IPR015500 -
Sed12g2432 1042 PRINTS Subtilisin serine protease family (S8) signature 211 230 IPR015500 -
Sed12g2432 1042 PRINTS Subtilisin serine protease family (S8) signature 414 430 IPR015500 -
Sed12g2432 1042 Pfam Membrane-bound Site-1 Protease Family N-terminal domain 57 130 - -
Sed12g2432 1042 PANTHER PEPTIDASE S8 28 671 IPR050131 GO:0004252(PANTHER)|GO:0005794(PANTHER)
Sed12g2432 1042 Coils Coil 105 125 - -
Sed12g2432 1042 FunFam subtilisin-like protease SBT6.1 183 477 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed12g2432 K08653 - csv:101222509 1876.29