Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed13g0030 | ATGAGCTCGTTTGCACTGGGAAAGAGCAGCAGCACTGCTATCTTCTTGGTTTTCATTTCCTTTTTTACAGCTCTGAATGATCTGTGCACATTATTAATTTCTGTGGACGCCAAAAGCAACGTGTACATTGTTTATTTGGGCAACAAACCACATGATAATGAAGAGTTGTTGGTAAAGACCCATCATGGAGTTCTTGCCTCTGTCCTTGGGAGCCAAGAGGCATCTGCAGATTCTATGGTATATAGCTATAAACATGGATTTTCTGGTTTTGCAGCAAAGCTTACCATGGCTCAAGCACAAATGATCTCGGAGTTGCCTTCAGTGGTTAAAGTCATACCCAATCGTCTTCACAAGATGCAAACCACCAGGAGCTGGGACTACCTTCAACTATCCCCACGATTTCCTAACTCTCTGTTACAGAAATCAAGAATGGGGAATGGTGCCATCATTGGCCTCCTTGATACAGGAATCTGGCCTGAAGCTGAAGTTTTCAGTGATGACGGTCTGGGGCCTATTCCCTCAAGGTGGAAAGGTATCTGCGAGGCAGGAGAGCTTTTCAATCCAGCAACGGCGTGTAGCAGAAAACTAATTGGAGCCCGATATTTCATCAAGGGGCTGGAAGCTTCATATGGACATTCATACAATTATAGTGGGCTCCAAGATTACTTGTCCCCGAGAGATTACTCAGGGCATGGCACACACGTCTCGTCAGTTGCCAGTGGTTCCTTTGTACCCAATGTTAGTTACCACGGCCTAGCTGTTGGAACAGTTAGGGGTGGTGCACCCCAGTCTCGGCTTGCCATGTATAAAGTTTGTTGGCGACTGAATGGAGGAGTATGCTCAGACATAGACTTACTCAAGGCCATCGACCAAGCGATATATGATGGTGTAGATGTGCTATCTCTGTCCCTTGGTCCTACCTTTCCTTCATATTTTGATATTGACATGAACAATGGGATTGCAATTGGCGCATTTCATGCTGTAGCAAAGGGGATTGTCGTTGTTGGTGCAGCTGGAAATTCTGGTCCAGCAGCTTACTCTGTAGGTAATCTAGAACCGTGGTTGTTTACGGTCGCTGCAAGCTCTGTGGACCGTTCATTCTTAGTAGAGATTACATTGGGAAACAACTGGACTACCGTGGGACAAGGGATGTTCAGCGGAAAATTGACGAGGTTTCGTAATTTACTGTATCCTGAGGTCTCTGATCTGGATGATCAACGTGCCTGCGAATCTCTATCCTTAAATGATACATGGGCAGCTGGAAATGTGGTTTTGTGTTTCGCATCAGATGATTATGATGACAATGCATATAATACTTCTTGGTTCGTCAAAAAAGTTGGTGGGTTGGGGCTTATTGTAGCCAAGAATCCTACCAAGTCTGTCGGACCATTCATTAACAACTTCCCATGTGTTCAAATAAGCCTTGATATTGGAATGCAGATACTCAACTATATTCGTTCTACCAGAAATCCTCAAGTCAAGATTGGTCCTTTAACAACACGTGTCGGTCACTCATTGTCCACCACGGTGGCCTACTTTTCATCTCGAGGACCTAATTCCATTGCTCCAGCTCTTCTGAAGCCAGATATTGCGGCTCCAGGCGTTGCTATTTTGGCTGCTGTTCCTCTCTCTGACCCAAAGGAAAGAAATTCATATGCTTTTATGTCTGGGACATCCATGGCAACTCCTCATGTATCAGCCATTGTTGCCCTTCTCAAATCATTGTACCCACATTGGTCCCCTGCTGCAATTAAGTCGGCCATAGTTACAACCGCCTGGACTTCGGATCCATATGGTGAAGTAATATTTGCAGAGGGACGACCAATGAAGTTTGCCGGTCCTTTTGATTTTGGAGGTGGAATTGTGAACCCTAATAAAGCAGTGGACCCTGGTCTCGTATATGATATGGGAATGGCGGAATATTTTCAGTATTTCTGTGCCATGGGCTACAACAACTCTGCCATTTCGGTGATCACCAAGAAGTTCAAATCTTGCCCCGAAAGACGGCCATCTATTTTGGATGTAAACGTACCATCCATAACGATTCCGTGGCTTAGACACTCAGTAAGTCTCACCAGAATTGTCACAAATGTGGGTTCAGTCAATTCCACATACAAGGCTGCTATTGAGCCCCCGCCCGGTGTAACCATAGTTGTGAAGCCTCCGATAATAAAATTCAACCACAAGATGAAGAGAATCCCCTTCACCGTTACGGTCTCTTCTAATCACAGAGTGTCAACCGGATACTGTTTTGGAAGCTTGACTTGGCTGGATGGAGTTCATTCGGTTAGAATCCCAATATCTGTAAGAACTAACACTTGA | 2322 | 45.05 | MSSFALGKSSSTAIFLVFISFFTALNDLCTLLISVDAKSNVYIVYLGNKPHDNEELLVKTHHGVLASVLGSQEASADSMVYSYKHGFSGFAAKLTMAQAQMISELPSVVKVIPNRLHKMQTTRSWDYLQLSPRFPNSLLQKSRMGNGAIIGLLDTGIWPEAEVFSDDGLGPIPSRWKGICEAGELFNPATACSRKLIGARYFIKGLEASYGHSYNYSGLQDYLSPRDYSGHGTHVSSVASGSFVPNVSYHGLAVGTVRGGAPQSRLAMYKVCWRLNGGVCSDIDLLKAIDQAIYDGVDVLSLSLGPTFPSYFDIDMNNGIAIGAFHAVAKGIVVVGAAGNSGPAAYSVGNLEPWLFTVAASSVDRSFLVEITLGNNWTTVGQGMFSGKLTRFRNLLYPEVSDLDDQRACESLSLNDTWAAGNVVLCFASDDYDDNAYNTSWFVKKVGGLGLIVAKNPTKSVGPFINNFPCVQISLDIGMQILNYIRSTRNPQVKIGPLTTRVGHSLSTTVAYFSSRGPNSIAPALLKPDIAAPGVAILAAVPLSDPKERNSYAFMSGTSMATPHVSAIVALLKSLYPHWSPAAIKSAIVTTAWTSDPYGEVIFAEGRPMKFAGPFDFGGGIVNPNKAVDPGLVYDMGMAEYFQYFCAMGYNNSAISVITKKFKSCPERRPSILDVNVPSITIPWLRHSVSLTRIVTNVGSVNSTYKAAIEPPPGVTIVVKPPIIKFNHKMKRIPFTVTVSSNHRVSTGYCFGSLTWLDGVHSVRIPISVRTNT | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 191029 | 194777 | - | Sed0020314.1 | Sed13g0030 | 733540 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed13g0030 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 145 | 164 | IPR015500 | - | |
Sed13g0030 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 556 | 572 | IPR015500 | - | |
Sed13g0030 | 773 | PRINTS | Subtilisin serine protease family (S8) signature | 227 | 240 | IPR015500 | - | |
Sed13g0030 | 773 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 557 | 567 | IPR023828 | - | |
Sed13g0030 | 773 | Pfam | Fibronectin type-III domain | 674 | 769 | IPR041469 | - | |
Sed13g0030 | 773 | SUPERFAMILY | Subtilisin-like | 18 | 696 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed13g0030 | 773 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 124 | 628 | - | - | |
Sed13g0030 | 773 | Gene3D | - | 364 | 502 | - | - | |
Sed13g0030 | 773 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 231 | 241 | IPR022398 | - | |
Sed13g0030 | 773 | Gene3D | - | 645 | 772 | - | - | |
Sed13g0030 | 773 | FunFam | p69E protein-like | 645 | 772 | - | - | |
Sed13g0030 | 773 | CDD | PA_subtilisin_like | 371 | 495 | - | - | |
Sed13g0030 | 773 | FunFam | Subtilisin-like protease SBT5.3 | 31 | 120 | - | - | |
Sed13g0030 | 773 | Pfam | Peptidase inhibitor I9 | 41 | 116 | IPR010259 | - | |
Sed13g0030 | 773 | Gene3D | Peptidase S8/S53 domain | 148 | 641 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed13g0030 | 773 | FunFam | Subtilisin-like protease SBT1.5 | 147 | 373 | - | - | |
Sed13g0030 | 773 | Pfam | Subtilase family | 145 | 592 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed13g0030 | 773 | FunFam | subtilisin-like protease SBT1.5 | 364 | 502 | - | - | |
Sed13g0030 | 773 | CDD | Peptidases_S8_3 | 117 | 593 | IPR034197 | - | |
Sed13g0030 | 773 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 32 | 120 | IPR037045 | - | |
Sed13g0030 | 773 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 42 | 767 | IPR045051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g1613 | Sed-Chr7:13389269 | Sed13g0030 | Sed-Chr13:191029 | 1.10E-175 | dispersed | |
Sed07g1614 | Sed-Chr7:13470038 | Sed13g0030 | Sed-Chr13:191029 | 1.90E-204 | dispersed | |
Sed13g0030 | Sed-Chr13:191029 | Sed13g0205 | Sed-Chr13:1331968 | 1.60E-118 | dispersed | |
Sed13g0030 | Sed-Chr13:191029 | Sed03g1334 | Sed-Chr3:8497376 | 7.70E-145 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed13g0030 | - | - | - | 0.0 |