Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed13g0205 | ATGGCAAAATCCCCTCTGAAACTCCTCTGTTTTCTCCTCTGTTTCCACTCACTCCATCTATCCAATGCCCAACTCTTCAAAACTTATGTGATTCAAATGGACAAATCCGCAATGCCGGACTCCTTTTCCGATCATTTGGAATGGTACTCCACTGTGCTAAACAGAGCAATTGTCAATCCTGATAAAGAAACCGACAATGGCGGAAAACAGAGGATTCTGTACGGCTACCAAAATGTCTTCCATGGAATTGCAGCTCGATTGAGTGAAGAAGAAGCTGAGAATCTCGAACAAGAAAATGGGGTTGTGGCAATTTTTCCTGAAGTGAAGTACGAGATTCATACGACGAGAAGCCCTAAATTTCTTGGGCTTGAACCGGCGGACAGCAACAGCGATTGGTCTCAACAAATTTCCGACCACGATGTGATTGTTGGAGTTTTGGATACCGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGCCGGAATGTCGCCGGTGCCGGCGAATTGGAAAGGGGAATGCGAAACAGGGCGAGGCTTCACGAAACAGAGCTGCAACAGAAAAATCGTTGGCGCCAGAGTTTTTTACCATGGCTACGAAGCTGCAACGGGGAAGTTTAACGAAGAAATGGAGTATAAATCGCCGAGAGATCAAGACGGGCATGGAACTCACACGGCAGCGACGGTGGCCGGAGCTCCGGTCGCCGGCGCGAGCTTGTTGGGTTATGCTTATGGAACGGCGAGAGGAATGGCGCCAGGTGCTAGGATTGCTGCTTATAAAGTCTGTTGGGTCGGCGGTTGTTTCAGCTCCGATATCTTGTCGGCGGTGGACAGGGCGGTAACTGACGGCGTAAATGTTCTGTCGATTTCTCTAGGTGGCGGCGTTTCTTCGTACTATCGTGATAGTCTCTCCGTTGCAGCGTTTGGAGCTATGGAAATGGGGGTTTTTGTTTCTTGCTCCGCTGGAAACGGCGGACCGGACCCTGTGAGTTTAACGAATGTCTCGCCGTGGATTACCACCGTCGGCGCTAGTACAATGGACAGAGATTTTCCGGCGATTGTGAAGCTCGGCGATAACAGAACAGTCTCCGGCGTTTCATTATACAGAGGAAAAATCACATTCCCGGAAAACAAACAATTCCCAATCGTTTACATGGGGAGTAATTCCACAAACCCAGATCCGAGTTCACTCTGTTTAGACGGAACATTAGATCCAAAAATCGTTACCGGAAAAATCGTTATATGCGACAGAGGAATCAGCCCGAGAGTTCAAAAGGGTGTAGTGGTGAAAAACGCCGGTGGAATTGGGATGATTCTGTCGAACACGGCGGCGAACGGGGAAGAACTCGTCGCCGATTGCCATTTAATTCCGGTGATTGCCGTCGGAGAAAAAGAAGGGAAATCGATTAAGCAATACGCAATCACGAATCGAAAATCGACGGCGGGATTTGGGTTTTTAGGGACGAGATTGGGTGTTAAACCGTCGCCGGTGGTGGCGGCGTTTTCATCTAGAGGACCGAATTTCCTCTCATTGGAGATTTTGAAACCGGATCTGGTCGCTCCCGGAGTTAATATTCTGGCGGCCTGGACCGGACAAATAGGGCCGTCGAGTTTAACGACGGATACAAGAAGAATCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGTCCACATGTTAGCGGCGTCGCCGCCGTAATCAAGTCGAAGAATCCAAATTGGAGTCCATCGGCGATCAAATCGGCGTTAATGACCACCGCCTACGTCCACGACAACACCTTTAAACCACTAAAAGACTCCGCCGGCGCCGGCTCCGGCGCCTCCGCATCGCCGTCTAGTCCGTACGACCACGGCGCCGGCCACATAAACCCAAGAAAAGCGCTAAATCCAGGATTGGTTTACGAAATCGAACCGCAAGATTACTTCGATTTTCTCTGTACCCAAGATTTAACTCCTCAACAGCTCAAAATCTTCTCGAAACACTCGAACAGGACTTGCAACCGCCGCCGTCTCCTCAACGCCGGCGATCTGAATTACCCGGCGATCTCCGCCGTCTTCCCGGAGAAAACCTCTGTTTCTTCCCTGACCCTTCACAGAACTGTCACTAACGTCGGCCCTGCTTCGTCCAGTTACCATGCGGTGGTGACGGCGTTCCACGGCGCCGCCGTGAAAGTCTCGCCGGAGAGGCTGAATTTCACGGCGAGATATCAGAAACTTTCTTACAAAATAACTTTTCAGACGAAAAAGAGACAGAGTATGCCGGAATTTGGTGGGCTGATTTGGAAAGATGGAATTCATACTGTGAGAAGCCCCATTGTTATCACTTGGTTGTCTTTTGTTTGA | 2340 | 49.79 | MAKSPLKLLCFLLCFHSLHLSNAQLFKTYVIQMDKSAMPDSFSDHLEWYSTVLNRAIVNPDKETDNGGKQRILYGYQNVFHGIAARLSEEEAENLEQENGVVAIFPEVKYEIHTTRSPKFLGLEPADSNSDWSQQISDHDVIVGVLDTGIWPESESFNDAGMSPVPANWKGECETGRGFTKQSCNRKIVGARVFYHGYEAATGKFNEEMEYKSPRDQDGHGTHTAATVAGAPVAGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVTDGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDNRTVSGVSLYRGKITFPENKQFPIVYMGSNSTNPDPSSLCLDGTLDPKIVTGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLIPVIAVGEKEGKSIKQYAITNRKSTAGFGFLGTRLGVKPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWTGQIGPSSLTTDTRRIKFNILSGTSMSCPHVSGVAAVIKSKNPNWSPSAIKSALMTTAYVHDNTFKPLKDSAGAGSGASASPSSPYDHGAGHINPRKALNPGLVYEIEPQDYFDFLCTQDLTPQQLKIFSKHSNRTCNRRRLLNAGDLNYPAISAVFPEKTSVSSLTLHRTVTNVGPASSSYHAVVTAFHGAAVKVSPERLNFTARYQKLSYKITFQTKKRQSMPEFGGLIWKDGIHTVRSPIVITWLSFV | 779 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1331968 | 1334665 | + | Sed0000328.1 | Sed13g0205 | 733715 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed13g0205 | 779 | Gene3D | - | 644 | 776 | - | - | |
Sed13g0205 | 779 | Pfam | PA domain | 380 | 468 | IPR003137 | - | |
Sed13g0205 | 779 | SUPERFAMILY | Subtilisin-like | 112 | 631 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed13g0205 | 779 | CDD | PA_subtilisin_like | 353 | 481 | - | - | |
Sed13g0205 | 779 | MobiDBLite | consensus disorder prediction | 599 | 621 | - | - | |
Sed13g0205 | 779 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 113 | IPR037045 | - | |
Sed13g0205 | 779 | FunFam | Subtilisin-like protease SBT1.5 | 140 | 361 | - | - | |
Sed13g0205 | 779 | Pfam | Fibronectin type-III domain | 675 | 773 | IPR041469 | - | |
Sed13g0205 | 779 | CDD | Peptidases_S8_3 | 110 | 587 | IPR034197 | - | |
Sed13g0205 | 779 | Pfam | Subtilase family | 139 | 593 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed13g0205 | 779 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 551 | 561 | IPR023828 | - | |
Sed13g0205 | 779 | PRINTS | Subtilisin serine protease family (S8) signature | 550 | 566 | IPR015500 | - | |
Sed13g0205 | 779 | PRINTS | Subtilisin serine protease family (S8) signature | 216 | 229 | IPR015500 | - | |
Sed13g0205 | 779 | PRINTS | Subtilisin serine protease family (S8) signature | 138 | 157 | IPR015500 | - | |
Sed13g0205 | 779 | Gene3D | Peptidase S8/S53 domain | 140 | 640 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed13g0205 | 779 | FunFam | Subtilisin-like protease SBT1.9 | 17 | 113 | - | - | |
Sed13g0205 | 779 | FunFam | subtilisin-like protease SBT1.5 | 346 | 489 | - | - | |
Sed13g0205 | 779 | Pfam | Peptidase inhibitor I9 | 28 | 113 | IPR010259 | - | |
Sed13g0205 | 779 | Gene3D | - | 346 | 490 | - | - | |
Sed13g0205 | 779 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 109 | 627 | - | - | |
Sed13g0205 | 779 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 772 | IPR045051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed12g1704 | Sed-Chr12:28243348 | Sed13g0205 | Sed-Chr13:1331968 | 5.10E-210 | dispersed | |
Sed13g0030 | Sed-Chr13:191029 | Sed13g0205 | Sed-Chr13:1331968 | 1.60E-118 | dispersed | |
Sed14g1662 | Sed-Chr14:24747031 | Sed13g0205 | Sed-Chr13:1331968 | 4.80E-92 | dispersed | |
Sed13g0205 | Sed-Chr13:1331968 | Sed10g0690 | Sed-Chr10:4821375 | 4.30E-228 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed13g0205 | - | - | - | 0.0 |