Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0205 ATGGCAAAATCCCCTCTGAAACTCCTCTGTTTTCTCCTCTGTTTCCACTCACTCCATCTATCCAATGCCCAACTCTTCAAAACTTATGTGATTCAAATGGACAAATCCGCAATGCCGGACTCCTTTTCCGATCATTTGGAATGGTACTCCACTGTGCTAAACAGAGCAATTGTCAATCCTGATAAAGAAACCGACAATGGCGGAAAACAGAGGATTCTGTACGGCTACCAAAATGTCTTCCATGGAATTGCAGCTCGATTGAGTGAAGAAGAAGCTGAGAATCTCGAACAAGAAAATGGGGTTGTGGCAATTTTTCCTGAAGTGAAGTACGAGATTCATACGACGAGAAGCCCTAAATTTCTTGGGCTTGAACCGGCGGACAGCAACAGCGATTGGTCTCAACAAATTTCCGACCACGATGTGATTGTTGGAGTTTTGGATACCGGGATTTGGCCGGAGAGTGAGAGCTTCAACGACGCCGGAATGTCGCCGGTGCCGGCGAATTGGAAAGGGGAATGCGAAACAGGGCGAGGCTTCACGAAACAGAGCTGCAACAGAAAAATCGTTGGCGCCAGAGTTTTTTACCATGGCTACGAAGCTGCAACGGGGAAGTTTAACGAAGAAATGGAGTATAAATCGCCGAGAGATCAAGACGGGCATGGAACTCACACGGCAGCGACGGTGGCCGGAGCTCCGGTCGCCGGCGCGAGCTTGTTGGGTTATGCTTATGGAACGGCGAGAGGAATGGCGCCAGGTGCTAGGATTGCTGCTTATAAAGTCTGTTGGGTCGGCGGTTGTTTCAGCTCCGATATCTTGTCGGCGGTGGACAGGGCGGTAACTGACGGCGTAAATGTTCTGTCGATTTCTCTAGGTGGCGGCGTTTCTTCGTACTATCGTGATAGTCTCTCCGTTGCAGCGTTTGGAGCTATGGAAATGGGGGTTTTTGTTTCTTGCTCCGCTGGAAACGGCGGACCGGACCCTGTGAGTTTAACGAATGTCTCGCCGTGGATTACCACCGTCGGCGCTAGTACAATGGACAGAGATTTTCCGGCGATTGTGAAGCTCGGCGATAACAGAACAGTCTCCGGCGTTTCATTATACAGAGGAAAAATCACATTCCCGGAAAACAAACAATTCCCAATCGTTTACATGGGGAGTAATTCCACAAACCCAGATCCGAGTTCACTCTGTTTAGACGGAACATTAGATCCAAAAATCGTTACCGGAAAAATCGTTATATGCGACAGAGGAATCAGCCCGAGAGTTCAAAAGGGTGTAGTGGTGAAAAACGCCGGTGGAATTGGGATGATTCTGTCGAACACGGCGGCGAACGGGGAAGAACTCGTCGCCGATTGCCATTTAATTCCGGTGATTGCCGTCGGAGAAAAAGAAGGGAAATCGATTAAGCAATACGCAATCACGAATCGAAAATCGACGGCGGGATTTGGGTTTTTAGGGACGAGATTGGGTGTTAAACCGTCGCCGGTGGTGGCGGCGTTTTCATCTAGAGGACCGAATTTCCTCTCATTGGAGATTTTGAAACCGGATCTGGTCGCTCCCGGAGTTAATATTCTGGCGGCCTGGACCGGACAAATAGGGCCGTCGAGTTTAACGACGGATACAAGAAGAATCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGTCCACATGTTAGCGGCGTCGCCGCCGTAATCAAGTCGAAGAATCCAAATTGGAGTCCATCGGCGATCAAATCGGCGTTAATGACCACCGCCTACGTCCACGACAACACCTTTAAACCACTAAAAGACTCCGCCGGCGCCGGCTCCGGCGCCTCCGCATCGCCGTCTAGTCCGTACGACCACGGCGCCGGCCACATAAACCCAAGAAAAGCGCTAAATCCAGGATTGGTTTACGAAATCGAACCGCAAGATTACTTCGATTTTCTCTGTACCCAAGATTTAACTCCTCAACAGCTCAAAATCTTCTCGAAACACTCGAACAGGACTTGCAACCGCCGCCGTCTCCTCAACGCCGGCGATCTGAATTACCCGGCGATCTCCGCCGTCTTCCCGGAGAAAACCTCTGTTTCTTCCCTGACCCTTCACAGAACTGTCACTAACGTCGGCCCTGCTTCGTCCAGTTACCATGCGGTGGTGACGGCGTTCCACGGCGCCGCCGTGAAAGTCTCGCCGGAGAGGCTGAATTTCACGGCGAGATATCAGAAACTTTCTTACAAAATAACTTTTCAGACGAAAAAGAGACAGAGTATGCCGGAATTTGGTGGGCTGATTTGGAAAGATGGAATTCATACTGTGAGAAGCCCCATTGTTATCACTTGGTTGTCTTTTGTTTGA 2340 49.79 MAKSPLKLLCFLLCFHSLHLSNAQLFKTYVIQMDKSAMPDSFSDHLEWYSTVLNRAIVNPDKETDNGGKQRILYGYQNVFHGIAARLSEEEAENLEQENGVVAIFPEVKYEIHTTRSPKFLGLEPADSNSDWSQQISDHDVIVGVLDTGIWPESESFNDAGMSPVPANWKGECETGRGFTKQSCNRKIVGARVFYHGYEAATGKFNEEMEYKSPRDQDGHGTHTAATVAGAPVAGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVTDGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDNRTVSGVSLYRGKITFPENKQFPIVYMGSNSTNPDPSSLCLDGTLDPKIVTGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLIPVIAVGEKEGKSIKQYAITNRKSTAGFGFLGTRLGVKPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWTGQIGPSSLTTDTRRIKFNILSGTSMSCPHVSGVAAVIKSKNPNWSPSAIKSALMTTAYVHDNTFKPLKDSAGAGSGASASPSSPYDHGAGHINPRKALNPGLVYEIEPQDYFDFLCTQDLTPQQLKIFSKHSNRTCNRRRLLNAGDLNYPAISAVFPEKTSVSSLTLHRTVTNVGPASSSYHAVVTAFHGAAVKVSPERLNFTARYQKLSYKITFQTKKRQSMPEFGGLIWKDGIHTVRSPIVITWLSFV 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1331968 1334665 + Sed0000328.1 Sed13g0205 733715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0205 779 Gene3D - 644 776 - -
Sed13g0205 779 Pfam PA domain 380 468 IPR003137 -
Sed13g0205 779 SUPERFAMILY Subtilisin-like 112 631 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed13g0205 779 CDD PA_subtilisin_like 353 481 - -
Sed13g0205 779 MobiDBLite consensus disorder prediction 599 621 - -
Sed13g0205 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Sed13g0205 779 FunFam Subtilisin-like protease SBT1.5 140 361 - -
Sed13g0205 779 Pfam Fibronectin type-III domain 675 773 IPR041469 -
Sed13g0205 779 CDD Peptidases_S8_3 110 587 IPR034197 -
Sed13g0205 779 Pfam Subtilase family 139 593 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed13g0205 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Sed13g0205 779 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Sed13g0205 779 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Sed13g0205 779 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Sed13g0205 779 Gene3D Peptidase S8/S53 domain 140 640 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed13g0205 779 FunFam Subtilisin-like protease SBT1.9 17 113 - -
Sed13g0205 779 FunFam subtilisin-like protease SBT1.5 346 489 - -
Sed13g0205 779 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Sed13g0205 779 Gene3D - 346 490 - -
Sed13g0205 779 ProSiteProfiles Serine proteases, subtilase domain profile. 109 627 - -
Sed13g0205 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 772 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed12g1704 Sed-Chr12:28243348 Sed13g0205 Sed-Chr13:1331968 5.10E-210 dispersed
Sed13g0030 Sed-Chr13:191029 Sed13g0205 Sed-Chr13:1331968 1.60E-118 dispersed
Sed14g1662 Sed-Chr14:24747031 Sed13g0205 Sed-Chr13:1331968 4.80E-92 dispersed
Sed13g0205 Sed-Chr13:1331968 Sed10g0690 Sed-Chr10:4821375 4.30E-228 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0205 - - - 0.0