Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0276 ATGCCTGGCATACCTCTCGTGTCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCTGATGTGCCATGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCGGTTGAACTATATAACATTTTTCAACGCCACACTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAACAGAGACAAAACACAAGAGAAGGATCCAGATGACCATTTCAATTTCTAGGACTTCGAGCGGGGATGGCCAGACACATAATATGTTTCCCATGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTTAGTCGAGCTCGCCTCTTAACTGGGGTCAACAGAGCAGTGCGCAGTTCTCAAGTTATAGCTAATTTTGTCCTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCCACAAATACTTTGTCTGGAGTAGATTCAGTTGATGGAAACATGGCATCTGTTCCTGTTACAGGTTATTGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCTTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAAGTCAAAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCATATGATTCATACACATGCAGTGAAATTCCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACCGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTTTTCAACTTCAAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCATGAAGACTGATGTTTGGCGGTCTGAGATCATCGCAAATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGCTCAAGGCATCTTAGACACAAAAAAGTTGTTCAAAGTGGAAAACGCGTACATCCTTTTGCTGTAGAGTCTGAATATTCAGACAAGGCGGATGATGCTCAATCTAGCAAAGATGAAAAGGCTCAAATATCAGGGCACAATCCTGCTCCAACTACGCGTCAATTTGCCAAGACAAGAAAATTGTCGGTCGAATGTGCAGACCCAAGACACTGTTCCCTTTCAAGGAAGAGACATTTCATTCATTCCCACAGAGCTCAGCCAATGGCACTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTAGATGATGATGTTGCCGATCTCGAGGATAAGAGGATGCTTGATGATTTTTTGGATGTAACCAAGGAGGAGAAGCAAATGATGCATATGTGGAACTCATTTATCAGGAAGCAACGGGTGCTGGCAGATGGGCATATTCCTTGGGCTTGCGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTCATGATTAAGTTGTGGAACCATGGTCTACTAGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGATTACATAGTGAAGCTTCTGATCCTAAAAGCTGA 1800 41.22 MPGIPLVSRETSCSRNADLMCHVESRVHLSEEEEIAAEESLSLYCKPVELYNIFQRHTIRNPLFLQRCLNYKTETKHKRRIQMTISISRTSSGDGQTHNMFPMYVILGRLVSDIAVAEFSGVYRFSRARLLTGVNRAVRSSQVIANFVLPEINKLAVEAKSGSLAILFVSCVGSTNTLSGVDSVDGNMASVPVTGYWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVKISAEEFGARDKSPYDSYTCSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFKFWVTEEYQAVNVSMKTDVWRSEIIANGIDPKQQTFFFRSRHLRHKKVVQSGKRVHPFAVESEYSDKADDAQSSKDEKAQISGHNPAPTTRQFAKTRKLSVECADPRHCSLSRKRHFIHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDKRMLDDFLDVTKEEKQMMHMWNSFIRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERLHSEASDPKS 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1925578 1937441 - Sed0004355.1 Sed13g0276 733786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0276 599 MobiDBLite consensus disorder prediction 429 445 - -
Sed13g0276 599 CDD ZnB-Zn_EMF2-like 292 371 - -
Sed13g0276 599 PANTHER POLYCOMB GROUP PROTEIN 2 598 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed13g0276 599 MobiDBLite consensus disorder prediction 414 445 - -
Sed13g0276 599 CDD VEFS-box_EMF2-like 465 590 - -
Sed13g0276 599 MobiDBLite consensus disorder prediction 414 428 - -
Sed13g0276 599 Pfam VEFS-Box of polycomb protein 450 585 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1238 Sed-Chr7:9202622 Sed13g0276 Sed-Chr13:1925578 5.60E-308 dispersed
Sed07g1239 Sed-Chr7:9202622 Sed13g0276 Sed-Chr13:1925578 1.40E-303 dispersed
Sed13g0276 Sed-Chr13:1925578 Sed13g0277 Sed-Chr13:1925578 0.00E+00 tandem
Sed13g0276 Sed-Chr13:1925578 Sed07g1234 Sed-Chr7:9202622 8.00E-307 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0276 - - - 0.0