Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0277 ATGCCTGGCATACCTCTCGTGTCTCGTGAAACTTCCTGTTCCAGAAACGCAGATCTGATGTGCCATGTAGAATCTCGTGTTCATCTATCTGAAGAAGAGGAAATTGCTGCAGAAGAGAGCCTCTCACTTTACTGCAAGCCGGTTGAACTATATAACATTTTTCAACGCCACACTATTAGAAATCCATTGTTTCTTCAAAGATGTTTAAACTACAAAACAGAGACAAAACACAAGAGAAGGATCCAGATGACCATTTCAATTTCTAGGACTTCGAGCGGGGATGGCCAGACACATAATATGTTTCCCATGTATGTCATCTTGGGAAGATTAGTCTCTGACATTGCAGTTGCTGAGTTCTCTGGTGTATATCGCTTTAGTCGAGCTCGCCTCTTAACTGGGGTCAACAGAGCAGTGCGCAGTTCTCAAGTTATAGCTAATTTTGTCCTCCCTGAAATTAACAAGCTAGCTGTGGAGGCAAAATCTGGGTCACTTGCTATATTATTTGTTAGCTGCGTTGGATCCACAAATACTTTGTCTGGAGTAGATTCAGTTGATGGAAACATGGCATCTGTTCCTGCAGTTACAGGTTATTGGGGCAAGATACCTCTGGAATCACTTTACATTTCGTGGCAGAATTCTTCAAATTTTGGTCTTGGACAGAGGGCTGAGATAATGTCAACTGTTGATATGCGCTCTTGTGTCTTGAAGACAAGTTGCTTGGATGGAGAGAAGTGTCTAGGATTTCAAATTCCATATAATTCTGATTCTATGCATACAGCACAGCAAGTACAAGTCAAAATTTCTGCAGAAGAGTTTGGTGCTAGGGATAAATCTCCATATGATTCATACACATGCAGTGAAATTCCTTCCTCATCACTATCTCATATGATTCGGTTGAGGGCGGGAAATGTTATTTTCAATTATAGGTACTACAACAATAGATTGCAAAAAACCGAAGTAACTGAAGACTTCTCCTGTCCATTTTGCTTGGTTAAATGTGCAAGCTTTAAGGGCTTGAGATGTCACTTGTTATCATTACACGATCTTTTCAACTTCAAATTTTGGGTAACTGAAGAGTATCAAGCTGTAAATGTTTCCATGAAGACTGATGTTTGGCGGTCTGAGATCATCGCAAATGGCATTGATCCAAAGCAGCAGACATTCTTCTTCCGCTCAAGGCATCTTAGACACAAAAAAGTTGTTCAAAGTGGAAAACGCGTACATCCTTTTGCTGTAGAGTCTGAATATTCAGACAAGGCGGATGATGCTCAATCTAGCAAAGATGAAAAGGCTCAAATATCAGGGCACAATCCTGCTCCAACTACGCGTCAATTTGCCAAGACAAGAAAATTGTCGGTCGAATGTGCAGACCCAAGACACTGTTCCCTTTCAAGGAAGAGACATTTCATTCATTCCCACAGAGCTCAGCCAATGGCACTGGAACAAGTGTTATCAGATCGAGATAGTGAAGATGAAGTAGATGATGATGTTGCCGATCTCGAGGATAAGAGGATGCTTGATGATTTTTTGGATGTAACCAAGGAGGAGAAGCAAATGATGCATATGTGGAACTCATTTATCAGGAAGCAACGGGTGCTGGCAGATGGGCATATTCCTTGGGCTTGCGAGGCATTTTCACAATTACATGGACCAAACCTTGTCAAAACTCCAGCTCTTCTATGGTGCTGGAGATTGTTCATGATTAAGTTGTGGAACCATGGTCTACTAGATGCAAACTCCATGAACAGTTGTAACATTATTCTTGAAAGATTACATAGTGAAGCTTCTGATCCTAAAAGCTGA 1803 41.26 MPGIPLVSRETSCSRNADLMCHVESRVHLSEEEEIAAEESLSLYCKPVELYNIFQRHTIRNPLFLQRCLNYKTETKHKRRIQMTISISRTSSGDGQTHNMFPMYVILGRLVSDIAVAEFSGVYRFSRARLLTGVNRAVRSSQVIANFVLPEINKLAVEAKSGSLAILFVSCVGSTNTLSGVDSVDGNMASVPAVTGYWGKIPLESLYISWQNSSNFGLGQRAEIMSTVDMRSCVLKTSCLDGEKCLGFQIPYNSDSMHTAQQVQVKISAEEFGARDKSPYDSYTCSEIPSSSLSHMIRLRAGNVIFNYRYYNNRLQKTEVTEDFSCPFCLVKCASFKGLRCHLLSLHDLFNFKFWVTEEYQAVNVSMKTDVWRSEIIANGIDPKQQTFFFRSRHLRHKKVVQSGKRVHPFAVESEYSDKADDAQSSKDEKAQISGHNPAPTTRQFAKTRKLSVECADPRHCSLSRKRHFIHSHRAQPMALEQVLSDRDSEDEVDDDVADLEDKRMLDDFLDVTKEEKQMMHMWNSFIRKQRVLADGHIPWACEAFSQLHGPNLVKTPALLWCWRLFMIKLWNHGLLDANSMNSCNIILERLHSEASDPKS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1925578 1937482 - Sed0004355.2 Sed13g0277 733787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0277 600 MobiDBLite consensus disorder prediction 415 446 - -
Sed13g0277 600 CDD VEFS-box_EMF2-like 466 591 - -
Sed13g0277 600 MobiDBLite consensus disorder prediction 415 429 - -
Sed13g0277 600 MobiDBLite consensus disorder prediction 430 446 - -
Sed13g0277 600 CDD ZnB-Zn_EMF2-like 293 372 - -
Sed13g0277 600 PANTHER POLYCOMB GROUP PROTEIN 2 599 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Sed13g0277 600 Pfam VEFS-Box of polycomb protein 451 586 IPR019135 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g0276 Sed-Chr13:1925578 Sed13g0277 Sed-Chr13:1925578 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0277 - - - 0.0