Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0476 ATGGCTTCGATCTCTATTGGGATTCACTTGCCCCCATCGCATCGTTGGAAGAGATTTTCACTTCAGTCACAGTCTTCCATTTCGCTCCCATTTCATACTTGTTATGGTTCTTCTTTGAGTAGAGTTAGAACTTCTAGGTTGCTTGGCAAGAACCTTCTTGCAAGGGCTGAAGATGAGGCGAAAGGCTCTTCGTCGGCGTCGTCTTCTTCGTTTCGGCAACAGGAAGGTTCACCCAACTTTGGCAAACAATTGGAGGAACTTACATCAAAATCAGGAACCTGTGATCCTCTATGTTCAGTTGACGAAATAAGTTCACAGGATTTTGAAGCTACTTATCAGCCAAAGACCGATTTACTAAAGGCTTTTGCGATATTTGTAGCAGCACTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGATTATTGATGGCAGTTGGCTTATGGGTTGTTCGAAGTATCGGGGCTCCATCCACTGAAGTTGCTGTTTCAGAGCTAACACATGCAACATCAGAAGTCAGTGAAATTGTATTTTTCTTACTTGGGGCGATGACCATAGTGGAAATTATCGATGCTCATCAAGGATTTAAGCTGGTTACGGACAGTATAACCACTCGAAAACCACGAACACTCCTCTGGGTGATTGGAGGTGTAACCTTTTTTCTAAGTTCGATCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTGCTGCGAAAACTAGTTCCTCAATCAGAGTTTCGCAAGTTACTTGGAGCTGTTATTGTTATAGCAGCTAATGCTGGTGGCGCATGGACTCCTATTGGAGATGTAACCACCACTATGCTGTGGATACATGGTCAGATATCAACAGTGCAGACACTCAAAGACTTGATTGTACCTTCTGCGGTTTCACTTGTAGTTCCGCTGGCGCTACTATCCTTAACTAGTGAAGTTAATGGAAAGGGACAGGAGGTTCCTAATGTCATGGCATCCGAGCAGATGGCTCCTCGAGGAAAGCTTGTTTTCTCTGTAGGTGTTGGAGCTTTGGTCTTCGTTCCAGTGTTCAAGGCCTTCACTGGTTTGCCCCCCTACATGGGGATGCTGCTTGGGCTAGGAATTCTTTGGATTCTGACTGATGCAATTCATTATGGCGAGTCGGAAAGGCAAAAGTTGAAAGTTCCTCAGGCTTTATCCCGCATCGATACGCAAGGAGCGCTTTTTTTCCTTGGAATCCTTTTGTCTGTCAGCAGCTTAGAGGCTTCGGGGATCTTACGGGAGTTAGCGAACTACCTCGACGCTCACATTCCGAATGTTGAACTCATAGCAAGTGCAGTTGGTGTTGTATCAGCAATAATAGACAATGTGCCACTAGTTGCAGCAACAATGGGAATGTATGATCTCTCCTCCTTCCATCAAGATTCAGAGTTCTGGCAGCTGATTGCATTTTGTGCTGGTACTGGTGGATCCATGCTTGTAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTAAAAAAGGTTAGCGGGTTTGCTTTTGCTGGATATGCTGCTGGAATTGCTGCCTATTTAGCTCTTCATAACCTCAGCATATCTCTGCCTACAACTATAGCTGAAGTGCCTTCTATTTTGGGTTCATAA 1746 44.56 MASISIGIHLPPSHRWKRFSLQSQSSISLPFHTCYGSSLSRVRTSRLLGKNLLARAEDEAKGSSSASSSSFRQQEGSPNFGKQLEELTSKSGTCDPLCSVDEISSQDFEATYQPKTDLLKAFAIFVAALTGTVAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVGLWVVRSIGAPSTEVAVSELTHATSEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVIGGVTFFLSSILDNLTTTIIMVSLLRKLVPQSEFRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTLKDLIVPSAVSLVVPLALLSLTSEVNGKGQEVPNVMASEQMAPRGKLVFSVGVGALVFVPVFKAFTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEASGILRELANYLDAHIPNVELIASAVGVVSAIIDNVPLVAATMGMYDLSSFHQDSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLKKVSGFAFAGYAAGIAAYLALHNLSISLPTTIAEVPSILGS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3232652 3239035 - Sed0014414.1 Sed13g0476 733986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0476 581 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 51 578 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
Sed13g0476 581 NCBIfam sodium:proton antiporter NhaD 173 536 - -
Sed13g0476 581 MobiDBLite consensus disorder prediction 61 78 - -
Sed13g0476 581 Pfam Citrate transporter 157 489 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
Sed13g0476 581 MobiDBLite consensus disorder prediction 59 78 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0476 - - - 0.0