Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0494 ATGATGGGTTTTTTCGCTAATCAAAGAGGAGGGTCCAGATCATGGGCCACCACCGGCGTGGAGTCGTTGCCGGTGTCGAGTGGGGTTCCGATTCCACCCAAGAAAAAATGCCCAAACGCGATGCCTCTGTTCATCGCTCTCGTCGTCGTAGCGGAGATTCTGTTTCTGGCTCGGCTTGATGTTGCCAAAAATGTAGCCATGGTCGATTCCTGGGCCGACTTGTTCTACCGCTCCCCGCCTTCCCGTGGTCTGATCGCTGGCGATGATGGTTTCGGTTCCCGATCGTCGGTCGACGGCGATCGGGTTTCGGAATTGGGGATTTGTGAGGAGTGGTTGGAGAAAGAAGATGCTGTGACGTATTCCAGAGATTTTCAAAAGGATCCCATATTGGTTTCTGGTTCTGATGAGGGGAGGAGGTCTTGTGCCATAGGATGTGAATTTGAGACCAATCCAAGTAAAGATTCCGATGCTGGTTTTGGTTTAAATACCAAGAGAGAAACGCCTTCAATTCTTCGATCCATGGAATCGGCTCTATATTATACAGAGAACAATATTGCTCAGGCACGAGGGAAGGGTTATGGTATCATAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCGCTTGCAGCTGCTTTCATTTCAAATTGTGCTGCTCGTAACTTCCGTATGGAAGCTCTCGAGGGTCTTGAAAAGCTGAAGATCGCAATAGATTCATATGGTGGTTGCCACAGAAATCGTGATGGAAGCAAAGTGAACAAATTGGAAACTCTGAAGCGCTACAAGTTTAGCTTCGCTTTTGAGAACTCCAACGAGGAAGATTATGTGACAGAAAAATATTTCCAATCTCTAGTTGCTGGAGCCATTCCAGTGGTTATTGGAGCTCCAAACATTCAAGACTTTGCTCCTTCACCTACTTCATTTTTGCATATCAAGGAGCTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCAGCAAATCCTGATGCTTTCAACAATTCTTTAAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAGGCATTATTGGACATGGCAGCAGTTCATTCGTCATGTCGCCTTTGCATTCATTTGGCAACTGGTATTCATGAGAAAGAAGAAAAGGGTCTAGCGTTCAAAAACCGACCTTGTAAATGCACTAGAGGTTCGGAGACCGTTTATCACCTGTATGTAAGAGAAAGAGGAAGGTTTTATTCGGAGTCCATTTTCTTGAGGTCCAGTAATCTGACAGTAGAAGGGTTGGCATCAGCAGTGGTTTCAAAGTTCAAATCTCTGAATCATGAACCAATTTGGAAGCAAGAAAGGCCTGAAAGCATAAAAGGAGGGGAGGAATTAAGGTTGTATAAAATATACCCAGTTGGGTTGACACAGAGGCAAGCTTTATATACATTCAAATTTGAAGAGGATTCTGATCTCAGAAGGCATGTGGAAGATAACCCATGTGCCAAATTTGAAGCCATTTTTGTATAA 1560 44.74 MMGFFANQRGGSRSWATTGVESLPVSSGVPIPPKKKCPNAMPLFIALVVVAEILFLARLDVAKNVAMVDSWADLFYRSPPSRGLIAGDDGFGSRSSVDGDRVSELGICEEWLEKEDAVTYSRDFQKDPILVSGSDEGRRSCAIGCEFETNPSKDSDAGFGLNTKRETPSILRSMESALYYTENNIAQARGKGYGIIMTTSLSSDVPVGYFSWAEYDIMAPVQAKNESALAAAFISNCAARNFRMEALEGLEKLKIAIDSYGGCHRNRDGSKVNKLETLKRYKFSFAFENSNEEDYVTEKYFQSLVAGAIPVVIGAPNIQDFAPSPTSFLHIKELSDVESVANSMKYLAANPDAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATGIHEKEEKGLAFKNRPCKCTRGSETVYHLYVRERGRFYSESIFLRSSNLTVEGLASAVVSKFKSLNHEPIWKQERPESIKGGEELRLYKIYPVGLTQRQALYTFKFEEDSDLRRHVEDNPCAKFEAIFV 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3370297 3383761 - Sed0016548.1 Sed13g0494 734004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0494 519 Gene3D - 174 368 IPR038577 -
Sed13g0494 519 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 390 - -
Sed13g0494 519 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 175 368 - -
Sed13g0494 519 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 226 391 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Sed13g0494 519 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 68 491 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g2027 Sed-Chr10:36821595 Sed13g0494 Sed-Chr13:3370297 8.20E-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0494 K00753 - csv:101202837 863.988