Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed13g0629 | ATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGAGAGAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCGATTGCGGCGAAGATCTTTGCTGGACTCAGGATGTACGGCAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTTCTTAAAGCTCTTTGCAATGAAGCTGGATGGACTGTAGAACTTGATGGCACCACTTATCGTAAGGGATGCAAGCCAATCGAACGTATGGATGTGGTTGGGGGATCGGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGCTCATCTTCTTTTCCAAGTCCAGCAGCATCCTCATATGTAGCTAATCCAAATGCAGATGGCAGCTCACTTATCCCATGGCTCAAAAACCTTTCATCTTCATCGTCTTCGGCATCCTCGTCAAAATTCCCCAATCTCTATATTCATGGAGGTTCCATCAGTGCTCCCGTTACTCCTCCTCTGAGTTCCCCAACTGCCAGAACACCCCGACTCAAAGCCGACTGGGAGGACCAGTCTGTCCTTCCAGGATGGAGTGCACAATTCTATTCCTCCCAGCCAAATTCAACTCCACCGAGCCCCGGGCGTCAGATTGTTCCGAATCCAGAATGGTTTGCTGGCCTTAGGATTCCTCAGGGTCCCAATTCTCCAACATATAGTCTTGTATCTGCTAACCCATTTGGTTTCAAGGAAGCAGCAACAAATGGTGGAGGGTCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGTTCCCCTGCCATTGCAGCAGGCTCCGATCACACTGCTGATATTCCTATGGCAGAAGCGATCTCTGACGAGTTCGCATTCGGAAGCAATGCAGCAGGAATTGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGATCTAGAGCTCACACTTGGGAACTCAAAAACCAGGTAA | 975 | 50.46 | MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVELDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPAASSYVANPNADGSSLIPWLKNLSSSSSSASSSKFPNLYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQFYSSQPNSTPPSPGRQIVPNPEWFAGLRIPQGPNSPTYSLVSANPFGFKEAATNGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAEAISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSKTR | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 4291754 | 4297020 | + | Sed0012795.1 | Sed13g0629 | 734139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed13g0629 | 324 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 324 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Sed13g0629 | 324 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Sed13g0629 | 324 | MobiDBLite | consensus disorder prediction | 88 | 108 | - | - | |
Sed13g0629 | 324 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 139 | IPR008540 | - | |
Sed13g0629 | 324 | MobiDBLite | consensus disorder prediction | 91 | 108 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed08g2730 | Sed-Chr8:39108351 | Sed13g0629 | Sed-Chr13:4291754 | 2.10E-107 | dispersed | |
Sed13g0629 | Sed-Chr13:4291754 | Sed14g1094 | Sed-Chr14:20448004 | 3.30E-49 | dispersed | |
Sed13g0629 | Sed-Chr13:4291754 | Sed04g1537 | Sed-Chr4:30179520 | 2.90E-162 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40360 | PF05687 | BES1_N | 2.50E-64 | No_clan | Sed | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed13g0629 | - | - | - | 0.0 |