Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0665 ATGTCAACCAGCAACATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATCTGCTGATGAAGTTCTCGTCTGTGTCTCCGGTGACTGCAATTGCCAGCTTCAAAACTGTTAAATGGGCTTTCTCTTGCAGGGTTGTTGGTTGTCGATTGAACTTGGATGATTCCAGTACCAAGAAGACTCAGATGGAGAGAGTTAACTCCACCAATTCAAATGAGAAATTTAGCAATAAGGAGTTTATTAGTGTTGACTCACGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGGGGAGACTGCCTCATTGCGCGGTAGCAAAATGCAGGTATCTCCTGATCAAGCACAACTTCTTGCAATGCTCGTTCAGATTCTTGGTGCTAAGCGGTGCATTGAAGTGGGTGTTTACACTGGATACTCGTCCTTGGCCGTAGCACTAGTCCTACCAGAATCAGGGCGTTTAGTTGCCTGTGAAAAAGATGCCATATATCTTGACGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATGTAAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAACGAGGAATACTTCGAATTGCTTCTGCAACTGGTGAGGGTTGGCGGTCTAATTGTGATTGACAATGTCCTGTGGTACGGAAAAGTAGCCGACCCAACGGTAAATGACAAGAAGACTGATAGCATTAGGAGATTGAATGAAAAAATAATGAAAGACGATCGAGTCGGGATCAGTATGGTACCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 882 44.44 MSTSNMGLRFLSYPQRNLLMKFSSVSPVTAIASFKTVKWAFSCRVVGCRLNLDDSSTKKTQMERVNSTNSNEKFSNKEFISVDSRLYEYILSNVREPEILGKLRGETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACEKDAIYLDVAKRYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPTVNDKKTDSIRRLNEKIMKDDRVGISMVPIGDGMTICQKR 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4597356 4603155 + Sed0025257.1 Sed13g0665 734175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0665 293 CDD AdoMet_MTases 136 241 - -
Sed13g0665 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 87 293 IPR029063 -
Sed13g0665 293 Pfam O-methyltransferase 94 292 IPR002935 GO:0008171(InterPro)
Sed13g0665 293 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 76 293 IPR002935 GO:0008171(InterPro)
Sed13g0665 293 PANTHER O-METHYLTRANSFERASE-RELATED 80 292 IPR050362 GO:0008757(PANTHER)
Sed13g0665 293 Gene3D Vaccinia Virus protein VP39 65 293 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g0665 Sed-Chr13:4597356 Sed13g0667 Sed-Chr13:4597476 2.60E-162 dispersed
Sed13g0665 Sed-Chr13:4597356 Sed13g0666 Sed-Chr13:4597356 8.80E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0665 - - - 0.0