Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed13g0666 | ATGTCAACCAGCAACATGGGGCTGCGTTTTTTGTCATACCCACAGAGGAATCTGCTGATGAAGTTCTCGTCTGTGTCTCCGGTGACTGCAATTGCCAGCTTCAAAACTGTTAAATGGGCTTTCTCTTGCAGGGTTGTTGGTTGTCGATTGAACTTGGATGATTCCAGTACCAAGAAGACTCAGATGGAGAGAGTTAACTCCACCAATTCAAATGAGAAATTTAGCAATAAGGAGTTTATTAGTGTTGACTCACGGCTTTATGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGGGGAGACTGCCTCATTGCGCGGTAGCAAAATGCAGGGATACTCGTCCTTGGCCGTAGCACTAGTCCTACCAGAATCAGGGCGTTTAGTTGCCTGTGAAAAAGATGCCATATATCTTGACGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATGTAAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAACGAGGAATACTTCGAATTGCTTCTGCAACTGGTGAGGGTTGGCGGTCTAATTGTGATTGACAATGTCCTGTGGTACGGAAAAGTAGCCGACCCAACGGTAAATGACAAGAAGACTGATAGCATTAGGAGATTGAATGAAAAAATAATGAAAGACGATCGAGTCGGGATCAGTATGGTACCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA | 798 | 44.36 | MSTSNMGLRFLSYPQRNLLMKFSSVSPVTAIASFKTVKWAFSCRVVGCRLNLDDSSTKKTQMERVNSTNSNEKFSNKEFISVDSRLYEYILSNVREPEILGKLRGETASLRGSKMQGYSSLAVALVLPESGRLVACEKDAIYLDVAKRYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPTVNDKKTDSIRRLNEKIMKDDRVGISMVPIGDGMTICQKR | 265 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 4597356 | 4603155 | + | Sed0025257.2 | Sed13g0666 | 734176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed13g0666 | 265 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 48 | 265 | IPR002935 | GO:0008171(InterPro) | |
| Sed13g0666 | 265 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 117 | 265 | IPR029063 | - | |
| Sed13g0666 | 265 | Pfam | O-methyltransferase | 114 | 264 | IPR002935 | GO:0008171(InterPro) | |
| Sed13g0666 | 265 | PANTHER | O-METHYLTRANSFERASE-RELATED | 116 | 264 | IPR050362 | GO:0008757(PANTHER) | |
| Sed13g0666 | 265 | Gene3D | Vaccinia Virus protein VP39 | 65 | 265 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed13g0665 | Sed-Chr13:4597356 | Sed13g0666 | Sed-Chr13:4597356 | 8.80E-142 | tandem | |
| Sed13g0666 | Sed-Chr13:4597356 | Sed13g0667 | Sed-Chr13:4597476 | 3.60E-142 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed13g0666 | - | - | - | 0.0 |