Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0673 ATGGCGGAGGACGAAGTGATACTGTTGGATTGTTGGGGCAGCATGTTTGGGATGCGAGTTAGAATAGCCCTAGCCGAGAAGGGCGTGTCCTACGAATATGTAGAGCAAGATCTCAACAACAAGAGCCCTTTGCTTCTCCAGATGAACCCAATCTACAAGCAGATCCCTGTTCTTATCCATAATGGAAAACCCATTTGCCAATCTTCCATTATTGTGCAGTATATCGATGAAATCTGGAAGGGCAAAGCTCCTCTGCTGCCGTCCGATCCTTTTCAGAAAGCTCAGGCCAGATTTTGGGTGGATTTCATCGACCACAAGCTTTATGTTGCAACTAAGAAGACATGGGGCAGCAAGGGAGAGGAGCAGGAAGCAGGCAAGAAGGAGCTGATAGAAAATTTGAAGCAACTTGAAGAAGTTATTGGCCAAAAGCCTTACTTTGGAGGTGAGTGCTTGGGATTTGTAGACATTGCTTTGATTGGATTCTACCCTTGGTTTTATACCTATGAAACCATTGGGAACTTCAGCATTTAG 531 45.2 MAEDEVILLDCWGSMFGMRVRIALAEKGVSYEYVEQDLNNKSPLLLQMNPIYKQIPVLIHNGKPICQSSIIVQYIDEIWKGKAPLLPSDPFQKAQARFWVDFIDHKLYVATKKTWGSKGEEQEAGKKELIENLKQLEEVIGQKPYFGGECLGFVDIALIGFYPWFYTYETIGNFSI 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4642427 4645370 + Sed0019782.1 Sed13g0673 734183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0673 176 Coils Coil 119 139 - -
Sed13g0673 176 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 174 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Sed13g0673 176 Gene3D Glutaredoxin 1 88 - -
Sed13g0673 176 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Sed13g0673 176 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Sed13g0673 176 SUPERFAMILY GST C-terminal domain-like 77 176 IPR036282 -
Sed13g0673 176 Gene3D - 89 176 - -
Sed13g0673 176 SFLD Glutathione Transferase (cytosolic) 2 175 IPR040079 -
Sed13g0673 176 Pfam Glutathione S-transferase, C-terminal domain 122 168 - -
Sed13g0673 176 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Sed13g0673 176 CDD GST_N_Tau 6 79 - -
Sed13g0673 176 FunFam Tau class glutathione S-transferase 1 88 - -
Sed13g0673 176 SFLD Main.3: Omega- and Tau-like 2 175 IPR045073 -
Sed13g0673 176 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 176 IPR010987 -
Sed13g0673 176 CDD GST_C_Tau 90 176 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0886 Sed-Chr7:6394236 Sed13g0673 Sed-Chr13:4642427 1.10E-80 dispersed
Sed13g0673 Sed-Chr13:4642427 Sed14g0672 Sed-Chr14:6755120 1.20E-37 dispersed
Sed13g0672 Sed-Chr13:4630270 Sed13g0673 Sed-Chr13:4642427 6.70E-74 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0673 K00799 - csv:101218562 289.656