Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0692 ATGGAGTTGGTAAAGAAGATGAAGAACATGAAGCTGGTTTTGTGGATTGCAGCTGCGTTAATGGCGACTGTGATATTGCAGAGATTTTGGATGGGGGGTTTGAATTTTAATCAGGTTTGGAGAACTGTTTCTCAACATGGTAACACATATGATTCTCCCAAAAACGACCACAAGTTCATCAATGGCCTTCTTCCTCCAGGCTTCAATGAAAAAACCTGTTTAAGCAGATATCAACTGAACCTCTACAGAAAACCTTCTCCCCATAATCCCTCTTCCTCCCTCCTCTCCAAGCTCCGCCGCTACGAAGCCCTTCACCGCCGCTGCGGTCCCAATTCCCCGTCCTTCCGCCGCGCCCTCGCCGGTCTCAGCTCCCCCACAAACTCCACACCTCCACCCGAAGACTGCAAATACGCAGTCATTTTAACTCGCGACGGCCTCGGCAACCGAATCCTTGCCATCATCTCTGCATTCTTCTACGCCCTGATCTCTGATCGTGTCCTTCTAATCGACCACGGCAATGCCCTCCCCGACCTCTTCTGCGAGCCCTTTCTCGGATCCTCCTGGCTCCTACCATCCGATTTCCCTCTCCGCCACGAATTCGGGTCCTTCGGCCAATCATTCTCAGGGTCTTTCGGCAATGTGGTGAGAAATGGAATGTTGAACAAAACAATCCATGATTCTCCTCCGGCTTATCTGTACCTCCATCTCTCCCACGACGCCGGCAATTACGATAAGCTCTTTTACTGCGACCGGCAGCAGAGCCTCGTGTCGAAGATCCCATGGCTAATCATGGAGACGAATAACTACCTAGTTCCTGGTTTTTTTCTGGTTCCTTCTCTCAGAAAAGAGCTCGAGAAGCTATTTCCGGCGAAGGACACCGTGTTCCACCATCTCGGCCGGTACCTATTCCATCCTACGAACAGCGTCTGGGGGCTAATTTCAAGATCTTACAAGCCGTATCTCGCCAGAGCAAACGAAATGGTAGGGATACAGATCCGGATTTTCGGATCCGAATCCGGATCGGTCGAAGATCAGATGAACCAGCTACTAAATTGTACACAGAACAAGAAACTACTACCGGAGGTATCGTCTTCATCGTCGGAGAAGACGAACACCACAACATCGCAGGAAGTGAAAGTGGTACTAGTCACATCACTAAGTTCGCAATATTCAGAAACCCTAAAAGACATGTACCTGAACCATCCGGCCGCGAACGGCGGCGGGGCGGTGGTGGCGGTGTACCAGCCGAGCCACGAGGGGGTACAGAGCTCGGACAAGGCGGAGCACAACCGGAAGGCGCTGGCGGAGATCTACCTGCTGAGCCTGAGCGACGTGCTGGTGACGAGCGATTGGTCGACGTTCGGGTACGTGGCGCAGGGGCTGGGCGGAGTGAGGCCGTGGATGCTGTACAAGGCGGAGGAGAGGATTTTCGGGGCGATGCAGTGGTGGTTGGGGTACAGGACGAGGAGGGAGACGGCGGAGGGCTGGCCGTGCCGGCGGGCGGTGTCAATGGAGCCGTGCTTTCACACGCCGCCGGTTTGCGATTGCGATGAGATGAAGATGAAGAGAAGAGATGGCGGGAATGTTGTGCCGTTCGTGACGCATTGTGAAGATGCGAGTTGGGGTATAAAGCTGGTTGACAGAGATTAG 1650 53.39 MELVKKMKNMKLVLWIAAALMATVILQRFWMGGLNFNQVWRTVSQHGNTYDSPKNDHKFINGLLPPGFNEKTCLSRYQLNLYRKPSPHNPSSSLLSKLRRYEALHRRCGPNSPSFRRALAGLSSPTNSTPPPEDCKYAVILTRDGLGNRILAIISAFFYALISDRVLLIDHGNALPDLFCEPFLGSSWLLPSDFPLRHEFGSFGQSFSGSFGNVVRNGMLNKTIHDSPPAYLYLHLSHDAGNYDKLFYCDRQQSLVSKIPWLIMETNNYLVPGFFLVPSLRKELEKLFPAKDTVFHHLGRYLFHPTNSVWGLISRSYKPYLARANEMVGIQIRIFGSESGSVEDQMNQLLNCTQNKKLLPEVSSSSSEKTNTTTSQEVKVVLVTSLSSQYSETLKDMYLNHPAANGGGAVVAVYQPSHEGVQSSDKAEHNRKALAEIYLLSLSDVLVTSDWSTFGYVAQGLGGVRPWMLYKAEERIFGAMQWWLGYRTRRETAEGWPCRRAVSMEPCFHTPPVCDCDEMKMKRRDGGNVVPFVTHCEDASWGIKLVDRD 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4803175 4807189 - Sed0015352.1 Sed13g0692 734202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0692 549 Gene3D - 133 175 - -
Sed13g0692 549 Pfam Xyloglucan fucosyltransferase 42 516 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed13g0692 549 FunFam Galactoside 2-alpha-L-fucosyltransferase 133 184 - -
Sed13g0692 549 PANTHER FUCOSYLTRANSFERASE 2-RELATED 5 547 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed13g0692 549 Gene3D - 315 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1510 Sed-Chr6:39776036 Sed13g0692 Sed-Chr13:4803175 1.90E-142 dispersed
Sed13g0692 Sed-Chr13:4803175 Sed07g1952 Sed-Chr7:34033334 1.30E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0692 K13681 - csv:101222105 804.283