Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0726 ATGGCAATGGCGGCCACTTCCCTTTCGAATCTTCCTTCTGCTGTGTTCTTCCATGGAAATCTGCACAGAAATGAAATTGGGTTTGTGGGTATGACGAAACAACCCGCCAAGTATCTTAAATCTAATCTTAGAGGTTCTTTTGTTAGATGTCAATCAACTCAAGTTGATGAACCGAAAACAAAGAGAAATCTACTGGACAATGCAAGCAATCTTCTAACTAATTTGTTAAGTGGTGGAAATCTGGGATCTATGCCAACAGCTGAAGGTGCAGTCTCTGATTTGTTCGGTCGCCCACTCTTTTTTGCACTATATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCTAAAGCCTTTGTCGTCGTATCAGATCCAATTGTGGCAAGATATATTCTTCGAGAAAACGTATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCAATAATGGGTAAAGGACTAATACCAGCTGACCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAGGCTATGGCCAAAGTGTTTACTGATTGTTCAGAACGATCAATTCTGAAATTGGAGAAGCTTTTAGGAGAAGGTGAACTTCAGAAAGACAGAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTTTGATTTTGGTTCTGTAACTAAAGAATCCCCCGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATTCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAATGACTGTCTTGATGGTCTGATACGAAATGCTAGAGAAACACGAGAGGAAGCAGATGTTGAGAAGTTGCAGCAAAGAGATTATTCAAATCTCAAGGATGCCAGTCTCTTGCGTTTCTTAGTTGATATGCGGGGAGCTGATGTCGATGATCGGCAGCTTAGGGACGATCTGATGACAATGCTTATTGCTGGCCATGAAACAACTGCCGCTGTTCTTACATGGGCTGTTTTTCTTCTTGCACAAAACCCTTCAAAAATGAAAAAAGCACAAGAAGAGATTGATTTGGTTCTTGGAAAGGGGAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACGTCAGACTTATTGTTGCTGAGACTCTTCGATTGTTTCCTCAGCCACCATTGTTAATAAGACGAGCCCTCAAACTGGATACATTACCAGGAGGGTACAACGGAGACAAAAATGGATATGCAATTCCTTCAGGGACTGACATCTTCATCTCTGTATACAATCTCCATCGATCTCCATACTTTTGGGATAACCCTGAAGAATTTGAACCAGAGAGATTTGAAGTAAAGAAGGCGAGTGAGGGAATCGAGGGATGGGAAGGTTTCGACCCATCTAGAAGCCCTGGAGCTCTGTACCCGAACGAGATCGTATCAGACTTTTCGTTCTTGCCATTTGGTGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTCTAATGGAGTCAACCATAGCACTGGCTATGTTGCTGCAGAAGTTTGATGTGGAACTAAAAGGAAGTCCTGAATCTGTGGAACTGGTCACTGGTGCCACAATTCATACCAAAAGTGGGCTGTGGTGCAAACTGAGAAAAAGATCACAAGTGGATTAA 1746 41.87 MAMAATSLSNLPSAVFFHGNLHRNEIGFVGMTKQPAKYLKSNLRGSFVRCQSTQVDEPKTKRNLLDNASNLLTNLLSGGNLGSMPTAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENVFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFTDCSERSILKLEKLLGEGELQKDRTIELDMEAEFSSLALDIIGLGVFNFDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQEEIDLVLGKGRPTFELLKGLKYVRLIVAETLRLFPQPPLLIRRALKLDTLPGGYNGDKNGYAIPSGTDIFISVYNLHRSPYFWDNPEEFEPERFEVKKASEGIEGWEGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELKGSPESVELVTGATIHTKSGLWCKLRKRSQVD 581
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 5051897 5059631 - Sed0015103.1 Sed13g0726 734236
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0726 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 517 526 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed13g0726 581 Gene3D Cytochrome P450 86 581 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS P450 superfamily signature 358 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS P450 superfamily signature 515 524 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS P450 superfamily signature 524 535 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PANTHER CYTOCHROME P450 FAMILY 4 73 577 IPR050196 GO:0009507(PANTHER)
Sed13g0726 581 Pfam Cytochrome P450 106 567 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS E-class P450 group I signature 107 126 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS E-class P450 group I signature 367 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS E-class P450 group I signature 524 547 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS E-class P450 group I signature 347 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 PRINTS E-class P450 group I signature 514 524 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 SUPERFAMILY Cytochrome P450 95 577 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed13g0726 581 CDD CYP97 101 571 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed12g1720 Sed-Chr12:28384951 Sed13g0726 Sed-Chr13:5051897 9.00E-41 dispersed
Sed13g0726 Sed-Chr13:5051897 Sed13g1060 Sed-Chr13:9119606 1.80E-122 dispersed
Sed13g0726 Sed-Chr13:5051897 Sed13g1059 Sed-Chr13:9119606 1.20E-121 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0726 K24543 - csv:101210292 1054.66