Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g0751 ATGAGCGGCCAATCGCGCAAATGGTTCGTTCTGGTGGCGACGATATGGATTCAAGCGTTCACCGGCACCAACTTCGATTTCCCAGCCTATTCATCGCAATTGAAATCGGTTTTGGGAATTTCTCAGGTGGAGCTTAATTACTTAGCCACCGCCTCCGATCTCGGCAAGGTCTTTGGCTGGTCCTCTGGTTTGGCTCTGCTTTCGCTGCCGCTGCCGCTCGTTCTGTTCATCGCCGCGTTCATGGGATTGCTCGGCTACGGATTTCAGTGGCTCCTAATCGCCCGTTTCGTTTCCTTGCCTTATTTTCTGGTGTTTTTCCTGTGTTTGCTAGCCGGTTGCAGCATTTGTTGGTTCAACACAGTGTGCTTCGTCCTTTGCATTCGAAACTTCTCTGCAAATCGGCCATTAGCTTTATCTCTCACAGTGAGCTTCAATGGCGTCAGCGCCGCTTTCTACACCCTCGCCAGCAACGCCATCAACCCCTCCTCCCCCTCCACCTACCTCCTCCTCAACGCCCTCGTCCCCCTCCTCACCTCCGTCGCCGCCGTCTTCCCCGTCCTCCTCCAGCCCCCGCTCCACTCCCTCTCCCTCTCCTCCGCCGCCGTCCACCGCGACTCCCTCATCTTCCTCACCCTCAACTTCCTCGCCGCCGCCGTCGGCCTCTACCTCCTCCTCTTCGCCTCCTCCGCCGATCCGATGATGTCTCGCCTCCTCTTCATCGGAGCGCTCGTGCTCCTCATCCTCCCGCTCTGCATTCCCGGCGTCGTCTACGCCAAGGACTGGTTTCACCGAGCGGTCAACTCGAGTTTCAGCCTCGACGGATCCTCGAGCTTTCTCCTCGTCCACGATGAGGATCTGGAGTTTCACAAGGAGCTTCTCACTCGCGAGGCTAACGAGAGCTTCGGACATGGCGGATCTCAGTTGTTGTCTGAATCTGTACCGCTAATCGACGGTGAAATCGAATCGAAAAGGTGTTTTCGGAAACTGATTGCGGCGGATCAGTTGGCGATGCTTGGCGAAGAACATCCGTCCAGTCGATTGGTGAAACGGATCGATTTCTGGCTGTATTTCGTTGCGTACATTTGTGGAGGTACGATCGGACTTGTTTACAGTAACAATATAGGTCAGATCTCGCAATCGCTAGGGTTTGGATCTAGAACCACCGCCATTGTCACTCTCTACTCCTCCGCCTCCTTCTTCGGCCGCCTCCTCTCCGCCGTGCCGGACTACATTCGAGCGAAATTGTATTTTGCAAGAACAGGATGGCTTTCGATTGCGCTAATTCCGACTCCCATAGCGTTCTTCCTGCTATCGGCGTCGGCGAGCGCGGTGGCGGTGTATGCAGGGACAATGCTGATCGGTATGAGTTCCGGATTCATATTCGCAGCTGCGGTTTCGATCACGGCGGAGCTGTTTGGACCGAACAGTTTAGGTGTGAATCACAACATTTTGATCACGAACATTCCGATCGGGTCTCTGTTGTACGGGATGTTTGCGGCGGTGGTTTACGATTCTCAGGGGAGGAGCTCCGGCGACGGGGAGGCGGTGGTGTGCATGGGAAAAAGGTGCTATTTCTTGACGTTTGTTTTCTGTGGATGTGTTTCTGTTGTGGGATTGGTTTCGAGTTTGTTGTTGTTTTTTAGAACGAGACATGCTTATGAACAGTTTGAGACTACTAGGATTTCTAGCAGTACGAATCGATTGTATTGA 1710 53.86 MSGQSRKWFVLVATIWIQAFTGTNFDFPAYSSQLKSVLGISQVELNYLATASDLGKVFGWSSGLALLSLPLPLVLFIAAFMGLLGYGFQWLLIARFVSLPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLASNAINPSSPSTYLLLNALVPLLTSVAAVFPVLLQPPLHSLSLSSAAVHRDSLIFLTLNFLAAAVGLYLLLFASSADPMMSRLLFIGALVLLILPLCIPGVVYAKDWFHRAVNSSFSLDGSSSFLLVHDEDLEFHKELLTREANESFGHGGSQLLSESVPLIDGEIESKRCFRKLIAADQLAMLGEEHPSSRLVKRIDFWLYFVAYICGGTIGLVYSNNIGQISQSLGFGSRTTAIVTLYSSASFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASASAVAVYAGTMLIGMSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRSSGDGEAVVCMGKRCYFLTFVFCGCVSVVGLVSSLLLFFRTRHAYEQFETTRISSSTNRLY 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 5350332 5359071 + Sed0024391.1 Sed13g0751 734261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g0751 569 Gene3D MFS general substrate transporter like domains 346 558 IPR036259 -
Sed13g0751 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 556 - GO:0016020(PANTHER)
Sed13g0751 569 Pfam Nodulin-like 7 253 IPR010658 -
Sed13g0751 569 SUPERFAMILY MFS general substrate transporter 332 551 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2138 Sed-Chr4:35581231 Sed13g0751 Sed-Chr13:5350332 3.40E-161 dispersed
Sed13g0751 Sed-Chr13:5350332 Sed13g0752 Sed-Chr13:5350332 1.70E-229 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g0751 - - - 0.0