Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed13g1016 | ATGGCTCGATCTCGAACCATTCTCTTTTCTTTTGCTCTATTTTCTTTGTCTTCGATTTGTTTCTCTCACAAAATTGGCAGCGGGGGCGGTTATGACGGTTATTTGTATCCTCAATTTTATGATCGTTCTTGTCCTAGAGCTCAAGAGATAATCAAATATATTGTGGCTAAGGCTGTTGCCAAGGAAGCTCGCATGGCAGCTTCTTTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGTTGTGATGGTTCGCTGTTGTTAGATAGCAGTGTGACACTAGCTAGTGAGAAAATGTCCAATCCAAATAGGAACTCTGCTAGAGGCTTTGGAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCCCAAACTGTTTCTTGTGCTGATATTTTGGCAGTCGCTGCAAGAGACTCAACCGTCCTAACAGGAGGACCGAGTTGGGAAGTTCCACTTGGTAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGGTCTAACAATGACATTCCTGCTCCAAACAACACATTCCAAACCATTCTCACCAAGTTCAAGAGACAAGGCCTTGACATTGTTGATCTTGTTGCTCTTTCAGGGAGCCACACCATCGGAAACTCCCGATGCACCAGCTTCAGGCAACGACTCTACAACCAATCTGGCAATGCCAAGCCCGACTCTTCTCTCGATCCTTCGTATGCTGCTGAATTGCGCAAGGGATGCCCTAGATCAGGGGGTGACCAGAACCTCTTTTTCCTCGACTACGTCAGCCCAGTGAGGTTTGACAATTACTACTTCAAGAACCTCTTGGTTGGAAAGGGTCTGCTGAACTCAGACGAAGTTCTCTTCACGAAGAACGCACAATCGGCGGAGTTAGTGAGGGCATATGCAGAGAATTCAGAGCTGTTTTTTGAGCAATTTGCCAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTCACTGGTTCAAGGGGTGAGATCAGAAAGATTTGCAGGAGAGTTAACAAAAATTAG | 1014 | 45.36 | MARSRTILFSFALFSLSSICFSHKIGSGGGYDGYLYPQFYDRSCPRAQEIIKYIVAKAVAKEARMAASLLRLHFHDCFVKGCDGSLLLDSSVTLASEKMSNPNRNSARGFGVIDEIKSALEKECPQTVSCADILAVAARDSTVLTGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAKPDSSLDPSYAAELRKGCPRSGGDQNLFFLDYVSPVRFDNYYFKNLLVGKGLLNSDEVLFTKNAQSAELVRAYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKICRRVNKN | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 8275705 | 8276962 | + | Sed0001083.1 | Sed13g1016 | 734526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed13g1016 | 337 | PANTHER | PEROXIDASE 72-RELATED | 16 | 334 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | CDD | secretory_peroxidase | 35 | 334 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Sed13g1016 | 337 | SUPERFAMILY | Heme-dependent peroxidases | 35 | 335 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | FunFam | Peroxidase | 38 | 180 | - | - | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 252 | 267 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 268 | 285 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 309 | 322 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 127 | 137 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 44 | 63 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 68 | 88 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 193 | 205 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 146 | 161 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Plant peroxidase signature | 108 | 121 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Haem peroxidase superfamily signature | 66 | 80 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Haem peroxidase superfamily signature | 128 | 145 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Haem peroxidase superfamily signature | 146 | 158 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Haem peroxidase superfamily signature | 194 | 209 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | PRINTS | Haem peroxidase superfamily signature | 254 | 269 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | Pfam | Peroxidase | 53 | 299 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | FunFam | Peroxidase | 172 | 314 | - | - | |
Sed13g1016 | 337 | ProSitePatterns | Peroxidases active site signature. | 66 | 77 | IPR019794 | GO:0004601(InterPro) | |
Sed13g1016 | 337 | Gene3D | - | 39 | 335 | - | - | |
Sed13g1016 | 337 | ProSiteProfiles | Plant heme peroxidase family profile. | 34 | 335 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Sed13g1016 | 337 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 194 | 204 | IPR019793 | - | |
Sed13g1016 | 337 | Gene3D | Peroxidase, domain 2 | 172 | 315 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed06g1480 | Sed-Chr6:39529727 | Sed13g1016 | Sed-Chr13:8275705 | 1.20E-78 | dispersed | |
Sed13g1016 | Sed-Chr13:8275705 | Sed14g1158 | Sed-Chr14:20964850 | 8.90E-138 | dispersed | |
Sed13g1016 | Sed-Chr13:8275705 | Sed13g1017 | Sed-Chr13:8299105 | 3.60E-179 | tandem | |
Sed04g3084 | Sed-Chr4:41831546 | Sed13g1016 | Sed-Chr13:8275705 | 4.00E-82 | transposed | |
Sed13g0946 | Sed-Chr13:7171090 | Sed13g1016 | Sed-Chr13:8275705 | 1.90E-76 | transposed | |
Sed13g1039 | Sed-Chr13:8513063 | Sed13g1016 | Sed-Chr13:8275705 | 1.90E-56 | transposed | |
Sed10g0957 | Sed-Chr10:7825997 | Sed13g1016 | Sed-Chr13:8275705 | 8.20E-128 | wgd | |
Sed13g1016 | Sed-Chr13:8275705 | Sed07g2007 | Sed-Chr7:35039231 | 4.50E-73 | wgd | |
Sed13g1016 | Sed-Chr13:8275705 | Sed07g1667 | Sed-Chr7:14402524 | 2.00E-161 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed13g1016 | K00430 | - | csv:101223204 | 577.4 |