Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g1071 ATGGCTGGGCAGTCAGATCCTCACCTCACCCTATTTTCTGCAGAAGAGATTGAGTTTGTAGCTGAAGATGAAATGGTGGAGATTGTTCCTAATATGAGAATGGATTCTCTGAATTTGATCTGTGGGGATTATGGTCCGTTCTATCCCCAAATAGCAACGGAAGTTCCATTGTGGCTAGCGATTGCGCTGAAAAAAAGAGGAAAATGTGCAATTAGGCCCCCAGATTGGATTACAGTGGAAAAGTTGACCCAAATTTTGGAGGCAGAACGAGAGTCTCAAGGATCATTTCAAGTACTACCCTTCCATTATGTGGAAATATCAAAACTTCTTTTTGACCATGCACGAGATGACGTTCCTGACATGTATTTGGTGAGGTCTCTTATTGAAGACATCAGGGATGTTAGGTTTCACAAAGTTGAAACCAGCTTGGAGTCAATTGATACACGCACATCTGCCGTGAAGATTAAAGATCTATCTGCCATGGAAGTGAATATAGTTCGACCATTTGTGGGAAGAGCGCTTCAGGCGATTTACAAGCATGGAAATCCAGAGTTGGTCCCAGATCAAGAAAGGATAACCAATGTGCAGTCACAAGGACACGATCATGGACAAAGACGGCCTCTTCGGAGACGGTAG 636 43.55 MAGQSDPHLTLFSAEEIEFVAEDEMVEIVPNMRMDSLNLICGDYGPFYPQIATEVPLWLAIALKKRGKCAIRPPDWITVEKLTQILEAERESQGSFQVLPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTSAVKIKDLSAMEVNIVRPFVGRALQAIYKHGNPELVPDQERITNVQSQGHDHGQRRPLRRR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 9295092 9299423 - Sed0000199.1 Sed13g1071 734581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g1071 211 FunFam DNA replication complex GINS protein PSF2 78 194 - -
Sed13g1071 211 CDD GINS_A_psf2 66 182 - -
Sed13g1071 211 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Sed13g1071 211 Pfam GINS complex protein helical bundle domain 71 170 IPR021151 -
Sed13g1071 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
Sed13g1071 211 Gene3D - 78 191 - -
Sed13g1071 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 194 IPR007257 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)
Sed13g1071 211 CDD GINS_B_Psf2 13 74 - -
Sed13g1071 211 SUPERFAMILY GINS helical bundle-like 73 182 IPR036224 -
Sed13g1071 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634(InterPro)|GO:0006260(InterPro)
Sed13g1071 211 Gene3D - 12 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g1071 K10733 - csv:101212053 395.971