Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g1714 ATGTCAACTTCCCATTCGTGTGATCGACGCGACAATAACTCAAGTCCAACTGCAACAATTGTAGCTATAGGACTTGAAGGGAAGGATATAGAAGAACCTGAGGTACTGGTAGAAGGAAGTGACTTTTATGCTTTTCCTCGAGTGGACCCCGAAGGGAAACGGATTGCGTGGATCCAGTGGAACCACCCTAACATGCCATGGGATAAGTCAGAGCTTTGGGTTGGTTACATTTCTGAGAGTAGCAAAATCGACAAACGCGTATGTGTTGCTGGTTGTGATCCAGAGCTAGTGGAGTCTCCTACTGAGCCTAAGTGGTCCTCTAAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAGTGGGTTTTGGAATCTATACAAATGGTTTGAAGCAGATAACGAGGTGTCACCAGTTTATTCTTTGAATGCGGAATTTTCGCGACCATTATGGGTTTTCGGCACAAAATCGTATGGTTTCTTACCTGGCCATCAAGGAGAAAACTATATACTCTGCAGCTACAGGCAGCATGGGAGGTCATATCTTGGAGTCCTGGGTGATTCACAAAGCTTGCCATCATTGCTTGATATTCCCTTTTCAGATATTGATAATATTACTATTGGGAACCATTGTTTTTATGTGGAGGGTGCATCAGCATTTCATCCACCATCAATTGCTAAGGTTACTGTAGATGTGAAAAGCTTGAAAGTAGTTGAATTCACCATTATCTGGTCATCATCGCCTGATATTTTGGCATATAAGTCATATTTTAGCGCTCCTAAGTTAATTGAATTCGAGACGGAAGTGCTTGGTGAAAAGGCTTATGCCTATTTTTATCCACCTTTCAATCCCATTTACCAAGCTAGTGAGGATGAAAAGCCTCCATTGTTGCTGGAAAGCCATGGAGGCCCAACGGATGAATCACGTGGAATGTTAAATCTACGAATTCAGTATTGGACTAGTCGAGGATGGGCTTTTGTCAATGTTAACTATGGAGGAAGCTCTGGTTACGGTAGAGACTATCGGGAAAGGCTTTTGAGGAAGTGGGGAATTGTTGATGTCAATGATTGTTGCAGCTGTGCAACATATTTGGTCAATTCAGGAGTAGTTGATGCAGAGCGATTATGCATTACTGGGGAATCTGCTGGGGGATACACTACCCTGGCTGCTCTTGCTTTCAGAGACACATTCAAGGCTGGAGCTTCCTTGTATGGGATAGCTGACTTGCGCATGCTGAGCGACGAAATGCACAAGTTCGAATCTCATTATATTGACAATCTTGTTGGAGGTGAAAGAGATTATTATGAAAGGTCACCAATTAACTTTGTAGAAAAATTCTCTTGTCCAATAATCTTGTTCCAGGGATTGGATGATAAAGTTGTCCCTCCCATTCAAGCTCGTAAAATCTACGAAGCATTGAAGGCGAAAGGCCTTCCCGTTGCGTTAATCGAATACGAAGGAGAACAACACGGCTTTCGCAAGGCTGAGAACATAAAGTATACTTTGAAACAACAGATGCTGTTCTTTGCAAGATTAGTTGGACACTTTGAAGTGGCTGATTAG 1557 42.52 MSTSHSCDRRDNNSSPTATIVAIGLEGKDIEEPEVLVEGSDFYAFPRVDPEGKRIAWIQWNHPNMPWDKSELWVGYISESSKIDKRVCVAGCDPELVESPTEPKWSSKGELFFVTDRKSGFWNLYKWFEADNEVSPVYSLNAEFSRPLWVFGTKSYGFLPGHQGENYILCSYRQHGRSYLGVLGDSQSLPSLLDIPFSDIDNITIGNHCFYVEGASAFHPPSIAKVTVDVKSLKVVEFTIIWSSSPDILAYKSYFSAPKLIEFETEVLGEKAYAYFYPPFNPIYQASEDEKPPLLLESHGGPTDESRGMLNLRIQYWTSRGWAFVNVNYGGSSGYGRDYRERLLRKWGIVDVNDCCSCATYLVNSGVVDAERLCITGESAGGYTTLAALAFRDTFKAGASLYGIADLRMLSDEMHKFESHYIDNLVGGERDYYERSPINFVEKFSCPIILFQGLDDKVVPPIQARKIYEALKAKGLPVALIEYEGEQHGFRKAENIKYTLKQQMLFFARLVGHFEVAD 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 22179292 22203228 + Sed0014453.3 Sed13g1714 735224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g1714 518 Pfam Prolyl oligopeptidase family 311 512 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed13g1714 518 SUPERFAMILY alpha/beta-Hydrolases 269 511 IPR029058 -
Sed13g1714 518 SUPERFAMILY DPP6 N-terminal domain-like 11 145 - -
Sed13g1714 518 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 9 518 IPR050585 -
Sed13g1714 518 Gene3D alpha/beta hydrolase 250 515 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g1714 Sed-Chr13:22179292 Sed13g1716 Sed-Chr13:22179334 5.1e-310 dispersed
Sed13g1713 Sed-Chr13:22179292 Sed13g1714 Sed-Chr13:22179292 6.6e-310 tandem
Sed13g1714 Sed-Chr13:22179292 Sed13g1715 Sed-Chr13:22179334 5.1e-310 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g1714 - - - 0.0