Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g1715 ATGGTATCTGGGGACACTGTAGTTTTCTCTAATTTCGAGGATCAGAGACTGTATAAGCAATCCATTAACTCTAATGATTCTTCTCCTCGACCCCTTACTCCAAATTATGGTGGGCAATCAGTCAGTTATGCTGATGGAGTGTTTGATTTACATTTTAATCGGTATATTGCTGTACGAGAAGATCGACGCGACAATAACTCAAGTCCAACTGCAACAATTGTAGCTATAGGACTTGAAGGGAAGGATATAGAAGAACCTGAGGTACTGGTAGAAGGAAGTGACTTTTATGCTTTTCCTCGAGTGGACCCCGAAGGGAAACGGATTGCGTGGATCCAGTGGAACCACCCTAACATGCCATGGGATAAGTCAGAGCTTTGGGTTGGTTACATTTCTGAGAGTAGCAAAATCGACAAACGCGTATGTGTTGCTGGTTGTGATCCAGAGCTAGTGGAGTCTCCTACTGAGCCTAAGTGGTCCTCTAAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAGTGGGTTTTGGAATCTATACAAATGGTTTGAAGCAGATAACGAGGTGTCACCAGTTTATTCTTTGAATGCGGAATTTTCGCGACCATTATGGGTTTTCGGCACAAAATCGTATGGTTTCTTACCTGGCCATCAAGGAGAAAACTATATACTCTGCAGCTACAGGCAGCATGGGAGGTCATATCTTGGAGTCCTGGGTGATTCACAAAGCTTGCCATCATTGCTTGATATTCCCTTTTCAGATATTGATAATATTACTATTGGGAACCATTGTTTTTATGTGGAGGGTGCATCAGCATTTCATCCACCATCAATTGCTAAGGTTACTGTAGATGTGAAAAGCTTGAAAGTAGTTGAATTCACCATTATCTGGTCATCATCGCCTGATATTTTGGCATATAAGTCATATTTTAGCGCTCCTAAGTTAATTGAATTCGAGACGGAAGTGCTTGGTGAAAAGGCTTATGCCTATTTTTATCCACCTTTCAATCCCATTTACCAAGCTAGTGAGGATGAAAAGCCTCCATTGTTGCTGGAAAGCCATGGAGGCCCAACGGATGAATCACGTGGAATGTTAAATCTACGAATTCAGTATTGGACTAGTCGAGGATGGGCTTTTGTCAATGTTAACTATGGAGGAAGCTCTGGTTACGGTAGAGACTATCGGGAAAGGCTTTTGAGGAAGTGGGGAATTGTTGATGTCAATGATTGTTGCAGCTGTGCAACATATTTGGTCAATTCAGGAGTAGTTGATGCAGAGCGATTATGCATTACTGGGGAATCTGCTGGGGGATACACTACCCTGGCTGCTCTTGCTTTCAGAGACACATTCAAGGCTGGAGCTTCCTTGTATGGGATAGCTGACTTGCGCATGCTGAGCGACGAAATGCACAAGTTCGAATCTCATTATATTGACAATCTTGTTGGAGGTGAAAGAGATTATTATGAAAGGTCACCAATTAACTTTGTAGAAAAATTCTCTTGTCCAATAATCTTGTTCCAGGGATTGGATGATAAAGTTGTCCCTCCCATTCAAGCTCGTAAAATCTACGAAGCATTGAAGGCGAAAGGCCTTCCCGTTGCGTTAATCGAATACGAAGGAGAACAACACGGCTTTCGCAAGGCTGAGAACATAAAGTATACTTTGAAACAACAGATGCTGTTCTTTGCAAGATTAGTTGGACACTTTGAAGTGGCTGATTAG 1716 42.13 MVSGDTVVFSNFEDQRLYKQSINSNDSSPRPLTPNYGGQSVSYADGVFDLHFNRYIAVREDRRDNNSSPTATIVAIGLEGKDIEEPEVLVEGSDFYAFPRVDPEGKRIAWIQWNHPNMPWDKSELWVGYISESSKIDKRVCVAGCDPELVESPTEPKWSSKGELFFVTDRKSGFWNLYKWFEADNEVSPVYSLNAEFSRPLWVFGTKSYGFLPGHQGENYILCSYRQHGRSYLGVLGDSQSLPSLLDIPFSDIDNITIGNHCFYVEGASAFHPPSIAKVTVDVKSLKVVEFTIIWSSSPDILAYKSYFSAPKLIEFETEVLGEKAYAYFYPPFNPIYQASEDEKPPLLLESHGGPTDESRGMLNLRIQYWTSRGWAFVNVNYGGSSGYGRDYRERLLRKWGIVDVNDCCSCATYLVNSGVVDAERLCITGESAGGYTTLAALAFRDTFKAGASLYGIADLRMLSDEMHKFESHYIDNLVGGERDYYERSPINFVEKFSCPIILFQGLDDKVVPPIQARKIYEALKAKGLPVALIEYEGEQHGFRKAENIKYTLKQQMLFFARLVGHFEVAD 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 22179334 22203228 + Sed0014453.2 Sed13g1715 735225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g1715 571 SUPERFAMILY alpha/beta-Hydrolases 322 564 IPR029058 -
Sed13g1715 571 Pfam Prolyl oligopeptidase family 364 565 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed13g1715 571 SUPERFAMILY Tricorn protease N-terminal domain 4 200 - -
Sed13g1715 571 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 6 571 IPR050585 -
Sed13g1715 571 Gene3D alpha/beta hydrolase 303 568 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g1714 Sed-Chr13:22179292 Sed13g1715 Sed-Chr13:22179334 5.1e-310 tandem
Sed13g1715 Sed-Chr13:22179334 Sed13g1716 Sed-Chr13:22179334 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g1715 - - - 0.0