Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed13g1716 ATGGCTAATTCCGACATCTCATCTTCGGTCAGTGAGAAAATCACTTCGCCATATGGCTCATGGAAGTCTCCGATCACCGCCGGCGTCGTTTCCGGCGCCTCGAAGCGAATCGGCGGCACCGCGGTTGATGCTTCTGGTCGCCTTATCTGGCTTGAATCTCGGCCCTCTGATTCTGGGCGGGAAGTTCTTGTCAAAGAACCAGAGAGATTTGGGGATGAACTTATTGATGTTACTCCAAAGGAGTTTTCAGTTAGAACGACTGTTCATGAATACGGTGGAGGTGCTTTCATGGTATCTGGGGACACTGTAGTTTTCTCTAATTTCGAGGATCAGAGACTGTATAAGCAATCCATTAACTCTAATGATTCTTCTCCTCGACCCCTTACTCCAAATTATGGTGGGCAATCAGTCAGTTATGCTGATGGAGTGTTTGATTTACATTTTAATCGGTATATTGCTGTACGAGAAGATCGACGCGACAATAACTCAAGTCCAACTGCAACAATTGTAGCTATAGGACTTGAAGGGAAGGATATAGAAGAACCTGAGGTACTGGTAGAAGGAAGTGACTTTTATGCTTTTCCTCGAGTGGACCCCGAAGGGAAACGGATTGCGTGGATCCAGTGGAACCACCCTAACATGCCATGGGATAAGTCAGAGCTTTGGGTTGGTTACATTTCTGAGAGTAGCAAAATCGACAAACGCGTATGTGTTGCTGGTTGTGATCCAGAGCTAGTGGAGTCTCCTACTGAGCCTAAGTGGTCCTCTAAGGGAGAACTTTTTTTTGTTACTGATAGGAAAAGTGGGTTTTGGAATCTATACAAATGGTTTGAAGCAGATAACGAGGTGTCACCAGTTTATTCTTTGAATGCGGAATTTTCGCGACCATTATGGGTTTTCGGCACAAAATCGTATGGTTTCTTACCTGGCCATCAAGGAGAAAACTATATACTCTGCAGCTACAGGCAGCATGGGAGGTCATATCTTGGAGTCCTGGGTGATTCACAAAGCTTGCCATCATTGCTTGATATTCCCTTTTCAGATATTGATAATATTACTATTGGGAACCATTGTTTTTATGTGGAGGGTGCATCAGCATTTCATCCACCATCAATTGCTAAGGTTACTGTAGATGTGAAAAGCTTGAAAGTAGTTGAATTCACCATTATCTGGTCATCATCGCCTGATATTTTGGCATATAAGTCATATTTTAGCGCTCCTAAGTTAATTGAATTCGAGACGGAAGTGCTTGGTGAAAAGGCTTATGCCTATTTTTATCCACCTTTCAATCCCATTTACCAAGCTAGTGAGGATGAAAAGCCTCCATTGTTGCTGGAAAGCCATGGAGGCCCAACGGATGAATCACGTGGAATGTTAAATCTACGAATTCAGTATTGGACTAGTCGAGGATGGGCTTTTGTCAATGTTAACTATGGAGGAAGCTCTGGTTACGGTAGAGACTATCGGGAAAGGCTTTTGAGGAAGTGGGGAATTGTTGATGTCAATGATTGTTGCAGCTGTGCAACATATTTGGTCAATTCAGGAGTAGTTGATGCAGAGCGATTATGCATTACTGGGGAATCTGCTGGGGGATACACTACCCTGGCTGCTCTTGCTTTCAGAGACACATTCAAGGCTGGAGCTTCCTTGTATGGGATAGCTGACTTGCGCATGCTGAGCGACGAAATGCACAAGTTCGAATCTCATTATATTGACAATCTTGTTGGAGGTGAAAGAGATTATTATGAAAGGTCACCAATTAACTTTGTAGAAAAATTCTCTTGTCCAATAATCTTGTTCCAGGGATTGGATGATAAAGTTGTCCCTCCCATTCAAGCTCGTAAAATCTACGAAGCATTGAAGGCGAAAGGCCTTCCCGTTGCGTTAATCGAATACGAAGGAGAACAACACGGCTTTCGCAAGGCTGAGAACATAAAGTATACTTTGAAACAACAGATGCTGTTCTTTGCAAGATTAGTTGGACACTTTGAAGTGGCTGATTAG 2004 43.41 MANSDISSSVSEKITSPYGSWKSPITAGVVSGASKRIGGTAVDASGRLIWLESRPSDSGREVLVKEPERFGDELIDVTPKEFSVRTTVHEYGGGAFMVSGDTVVFSNFEDQRLYKQSINSNDSSPRPLTPNYGGQSVSYADGVFDLHFNRYIAVREDRRDNNSSPTATIVAIGLEGKDIEEPEVLVEGSDFYAFPRVDPEGKRIAWIQWNHPNMPWDKSELWVGYISESSKIDKRVCVAGCDPELVESPTEPKWSSKGELFFVTDRKSGFWNLYKWFEADNEVSPVYSLNAEFSRPLWVFGTKSYGFLPGHQGENYILCSYRQHGRSYLGVLGDSQSLPSLLDIPFSDIDNITIGNHCFYVEGASAFHPPSIAKVTVDVKSLKVVEFTIIWSSSPDILAYKSYFSAPKLIEFETEVLGEKAYAYFYPPFNPIYQASEDEKPPLLLESHGGPTDESRGMLNLRIQYWTSRGWAFVNVNYGGSSGYGRDYRERLLRKWGIVDVNDCCSCATYLVNSGVVDAERLCITGESAGGYTTLAALAFRDTFKAGASLYGIADLRMLSDEMHKFESHYIDNLVGGERDYYERSPINFVEKFSCPIILFQGLDDKVVPPIQARKIYEALKAKGLPVALIEYEGEQHGFRKAENIKYTLKQQMLFFARLVGHFEVAD 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 22179334 22203228 + Sed0014453.4 Sed13g1716 735226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed13g1716 667 Pfam Prolyl oligopeptidase family 460 661 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed13g1716 667 SUPERFAMILY alpha/beta-Hydrolases 418 660 IPR029058 -
Sed13g1716 667 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 4 667 IPR050585 -
Sed13g1716 667 SUPERFAMILY Tricorn protease N-terminal domain 87 294 - -
Sed13g1716 667 Gene3D alpha/beta hydrolase 399 664 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2641 Sed-Chr1:21014244 Sed13g1716 Sed-Chr13:22179334 2.60E-307 dispersed
Sed13g1713 Sed-Chr13:22179292 Sed13g1716 Sed-Chr13:22179334 0.00E+00 dispersed
Sed13g1714 Sed-Chr13:22179292 Sed13g1716 Sed-Chr13:22179334 5.1e-310 dispersed
Sed13g1715 Sed-Chr13:22179334 Sed13g1716 Sed-Chr13:22179334 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed13g1716 - - - 0.0