Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0046 ATGGAAGGAAAAGGAAATGGAATTGCTAATTTTGTTGAGGGGGCTCAGCCTTACATTGCTATGATCTCTCTCCAATTTGGATATGCTGGGATGAACATCATCACCAAGGTCGCTCTCAACCGCGGAATGAGTCACTACGTCCTCGTAACCTATCGTCAAGCCTTTGCCACCGTCGCCCTCGCTCCCTTCGCCTTCTTCCTCGAAAGGAAAGTGTGGCCCAAGATTAGTTTTCCTCTGTTCATGCAGATTTTCCTTCTTGGTTTGTTAGGACCAGTGATTGATCAGAACTTTTATTATGCTGGCTTGAAGCTCACATCTCCTACCTTCTCATGTGCCATGAGTAATATGCTTCCTGCAATGACATTCATTTTTGCTCTTCTTTGCAGGATGGAGAAGTTGGAAATGAAGAAATTGAGATGCCAAGCAAAGGTGGTGGGAACAATGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCTTCTTCTCCTTCAAACTACTCCTTTGAAAGCACTCATCAAGATTGGCTTAAGGGTTCCATTCTCCTCCTTTTTGCTAATCTTTCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCACATCTCTCACTTACAACCCTAGTGTGCTTCTTGGGAACTCTACAATCCATGGCTCTCACATTTGTAATGGAAAGCAAAGCATCTGTTTGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGCTTATGCTGGAATAGTTTCCTCAAGCATAGCTTACTATGTCCAAGGAATGGTCATGCAGAAGAGAGGTCCTGTGTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCACTATGGGCTCTTTCATGCTTCTTGAGAAAATTTATGTCGGACGTGTTCTTGGAGGTGTTCTAATGGTGGTGGGGCTGTACTCAGTGTTATGGGGGAAATACAGAGACTACAAAGAAAATGAAGCAATAGATCAAGAGGCCACCATTAATGTTGAAGCAGCAAAGCTTTTCCATGAAGAAAAAGTTGAGGAGAAAAAGAAGAAACTAGCAACCGTAGTAGAAGAAGAAGAAGAAGAAGAAGGAGAAACGACAAGAACATCATCAAACGACATCGAAATGCAAAGGAACGACACAACATCCAATGTCGGCAATAATGTTACAAAATTGCCATGTCCTTCTCCACCATCCATTATTGTTGTTATTGCTGTGGATGAAGCACCACCAAAAGTTTGA 1299 42.42 MEGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVWPKISFPLFMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFIFALLCRMEKLEMKKLRCQAKVVGTMVTVGGAILMTLYKGNVISFFWSHHNYLHSSSPSNYSFESTHQDWLKGSILLLFANLSWALFFILQAMTLRNYTAHLSLTTLVCFLGTLQSMALTFVMESKASVWNIGWDMNLLASAYAGIVSSSIAYYVQGMVMQKRGPVFVTAFTPMIMIIVATMGSFMLLEKIYVGRVLGGVLMVVGLYSVLWGKYRDYKENEAIDQEATINVEAAKLFHEEKVEEKKKKLATVVEEEEEEEGETTRTSSNDIEMQRNDTTSNVGNNVTKLPCPSPPSIIVVIAVDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 593769 598015 + Sed0014355.1 Sed14g0046 735764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0046 432 MobiDBLite consensus disorder prediction 374 410 - -
Sed14g0046 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Sed14g0046 432 MobiDBLite consensus disorder prediction 389 410 - -
Sed14g0046 432 PANTHER WAT1-RELATED PROTEIN 19 360 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed14g0046 432 Coils Coil 361 384 - -
Sed14g0046 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Sed14g0046 432 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g2680 Sed-Chr4:39178975 Sed14g0046 Sed-Chr14:593769 4.10E-121 dispersed
Sed07g2342 Sed-Chr7:39296968 Sed14g0046 Sed-Chr14:593769 1.50E-122 dispersed
Sed09g0696 Sed-Chr9:10255005 Sed14g0046 Sed-Chr14:593769 6.40E-65 dispersed
Sed09g0697 Sed-Chr9:10255005 Sed14g0046 Sed-Chr14:593769 5.70E-46 dispersed
Sed12g1459 Sed-Chr12:14680027 Sed14g0046 Sed-Chr14:593769 9.40E-96 dispersed
Sed12g1460 Sed-Chr12:14680956 Sed14g0046 Sed-Chr14:593769 1.20E-89 dispersed
Sed13g1605 Sed-Chr13:21247976 Sed14g0046 Sed-Chr14:593769 1.40E-57 dispersed
Sed14g0046 Sed-Chr14:593769 Sed14g0458 Sed-Chr14:4628729 3.70E-88 dispersed
Sed03g1222 Sed-Chr3:7858923 Sed14g0046 Sed-Chr14:593769 6.60E-65 transposed
Sed11g1698 Sed-Chr11:32220777 Sed14g0046 Sed-Chr14:593769 3.40E-61 transposed
Sed12g1169 Sed-Chr12:7782269 Sed14g0046 Sed-Chr14:593769 3.30E-123 transposed
Sed14g0046 Sed-Chr14:593769 Sed03g3111 Sed-Chr3:47810990 5.40E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0046 - - - 0.0