Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0154 ATGGCATTTTTGGGTTGTTATCTCTTCATTTTTCTTGTTGGGTTTCTCTTAAATTCCTTATTTTTGGGAGCTGTGCTTGATGATCAAATCACCATGGCTTCCATTAGAGAGGAGCTTCAAGTTCCTAGTTGGAGCTCCAACATTTCTGACTACTGTTCTTGGAAAGGTGTTCATTGTGGTTTGAATCATTCAATGGTTCAAGCTCTTGATCTTTCTAGCAATTCTCTTAGAGGTAATATAACTGTCATTTCTCAGCTCAAAGCTTTGAAATGGCTTGACCTTTCCTTCAATGACTTCCATGGCGAAATTTCAAGTTTTGCGAACCTTTTCGAGCTCGAATTCCTTGATTTATCTGTGAATAAGTTTGATGGTTTGATCCCACCCGGATTCAGTGGTCTCAAAAACCTCAAGTCATTGAACCTCTCCAATAATCTGCTTGTGGGAGAAATTCCAGTTGAGCTTCAAGGGTTAGAGAATTTGCAGGATTTTCACGTTTCTAGCAATAGATTGAGTGGTTCAATTCCAAGCTGGGTTGGGAATTTGACTCATCTTAGAGTTTTTACAGCTTATGAGAATGACTTTGGTGGTGTCATCCCTGATAATCTCGGCTCGGTTTCTAAACTTCTAGTGTTGAATCTGCATACCAATAGGCTTGAAGGCCCTATTCCTCGAAGCATTTTCGCTTCGGGGAAGCTGGAGATTTTGGTTCTGACTGAAAACAGATTGAATGGGAGTCTTCCTGAAGAGATTGGGAACTGCAAAAGCCTTACTAGTGTTCGAATTGGGAACAATGATCTTGTTGGTGTGATTCCTCCAGCCATTGGAAATGTTAGTAGCCTTGCCTACTTTGAAGTGGATAACAATCACCTTTCGGGCGGTATAGCATCTCAGATTTCGCGGTGCTCTAATCTTACTCTGCTGAATCTAGCCTCGAACGGATTCACTGGGACAATTCCTCCCGAGCTTGGCGAGCTGATGAATCTTCAGGAACTTATTCTTTCTGGTAACAGCCTGTATGGTGATATTCCAAGATCAATGCTCAAGTGCAAGAATCTCAACAAGCTTGATTTAAGCAGCAATAGATTGAATGGTACTATTCCTTCAGATATCTGCAATATATCAAGATTGCAGTATTTGCTTTTGGAACAGAATTCAATAAAAGGAGAGATACCTAATGAGATTGGAAAATGTTCAAAGCTTCTCGACCTGCGACTCGGAAGTAACTATTTAATTGGAAGTATCCCTTCCGAGATCGGTCGCATTAAGAACTTGCAGATAGCTTTGAATTTGAGTTTCAACCATCTAAATGGACCAGTGCCTCCTGAGTTGGGGAAACTTGATAAATTGGTTTCGTTAGATTTATCGAACAATCATCTCTCGGGCGATATCCCGTCCGAACTCAAGGGTATGTTAAGCTTGATAGAAGTGAACTTTTCAAATAATTTGCTTACTGGTTCGGTTCCCTTTTTTGTTCCATTTCAGAAAAGTGCAAATTCTAGTTTTCTGGGGAATGTTGGCCTTTGCGGGGCACCACTAAGCATTTTGTGTAAGAATTCGATTGGTCCATACAATCAAGATTATCGCCACAAGGTCTCGTACAAGATCATACTGGCCGTTATCGGTTCTGGACTGGCAGCTTTCGTATCAGTTACTATAGTTGTTTTACTCTTTATGATGAAAGAAAAGCAGGAAAAGGCAGCAAAATCTTCAGGGACTGCAGATGATGCAACCATCAACGATCAACCAACGATAATAGCAGGAAATATCTTCGACGATAATCTCCGACAGGAAATAGATCTCGATGCAGTCGTGAAAGCAACGTTGAAGGATTCAAACAAGCTCATCTTTGGCACTTTCAGTACCGTTTACAAGGCGGTTATGCCTTCGGGTATGATTGTATCAGTTAAGAGACTAAAATCCATGGATAAGACAATCATTCATCATCAAAGCAAGATGATCAGAGAGCTTGAAAGGCTTGGAAAACTGAGCCATGCAAATCTTTTGCAACTCATTGGATATGTAATATATGAAGATGTGGCTCTGTTGCTTCATCATTATTTACCCATTGGGACATTGGCTCAGCTTCTTCATGAGTCCACAAAACAACCTGAATATGAACCTGATTGGCCCACAAGATTTTCAGTTGCCATTGGAGCAGCAGAAGGGCTTGCTTTTCTTCATCATGTGGCCATAATTCATCTTGATATTTCATCATCCAATGTTCTTTTAGATGCGAACTTCAAACCTTTGGTTGGAGAGGTTGAGATCTCAAAACTGCTTGACCCATCAAGAGGAACTGCAAGTATTAGTGCAGTTGCTGGTTCATTTGGCTACATTGCACCAGAATATGCATATACGATGCAAGTTACGGCCCCGGGAAACGTTTACAGCTACGGTGTTATCTTGCTCGAGATCCTCACTACCAGGCTGCCAGTTGATGAGGAGTTTGGCGAAGGAGTAGACTTAGTGAAATGGGTGCACAGTGCTCCCTCGAGAGGCGAAACACCCGAACAGATACTCGATTCCCGGCTGAGCACAGTGTCATTTGGCTGGAGGAAGGAGATGCTTGCAGCTCTTAAGATAGCATTGCTCTGCACTGACAGCATACCAGCCAAACGGCCAAAAATGAAGAAGGTGGTGGAAATGCTTATGGAGATCAAGCAAAATTGA 2670 41.84 MAFLGCYLFIFLVGFLLNSLFLGAVLDDQITMASIREELQVPSWSSNISDYCSWKGVHCGLNHSMVQALDLSSNSLRGNITVISQLKALKWLDLSFNDFHGEISSFANLFELEFLDLSVNKFDGLIPPGFSGLKNLKSLNLSNNLLVGEIPVELQGLENLQDFHVSSNRLSGSIPSWVGNLTHLRVFTAYENDFGGVIPDNLGSVSKLLVLNLHTNRLEGPIPRSIFASGKLEILVLTENRLNGSLPEEIGNCKSLTSVRIGNNDLVGVIPPAIGNVSSLAYFEVDNNHLSGGIASQISRCSNLTLLNLASNGFTGTIPPELGELMNLQELILSGNSLYGDIPRSMLKCKNLNKLDLSSNRLNGTIPSDICNISRLQYLLLEQNSIKGEIPNEIGKCSKLLDLRLGSNYLIGSIPSEIGRIKNLQIALNLSFNHLNGPVPPELGKLDKLVSLDLSNNHLSGDIPSELKGMLSLIEVNFSNNLLTGSVPFFVPFQKSANSSFLGNVGLCGAPLSILCKNSIGPYNQDYRHKVSYKIILAVIGSGLAAFVSVTIVVLLFMMKEKQEKAAKSSGTADDATINDQPTIIAGNIFDDNLRQEIDLDAVVKATLKDSNKLIFGTFSTVYKAVMPSGMIVSVKRLKSMDKTIIHHQSKMIRELERLGKLSHANLLQLIGYVIYEDVALLLHHYLPIGTLAQLLHESTKQPEYEPDWPTRFSVAIGAAEGLAFLHHVAIIHLDISSSNVLLDANFKPLVGEVEISKLLDPSRGTASISAVAGSFGYIAPEYAYTMQVTAPGNVYSYGVILLEILTTRLPVDEEFGEGVDLVKWVHSAPSRGETPEQILDSRLSTVSFGWRKEMLAALKIALLCTDSIPAKRPKMKKVVEMLMEIKQN 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1793470 1797275 + Sed0005549.1 Sed14g0154 735872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0154 889 Gene3D Transferase(Phosphotransferase) domain 1 687 889 - -
Sed14g0154 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 578 686 - -
Sed14g0154 889 Pfam Leucine rich repeat N-terminal domain 42 59 IPR013210 -
Sed14g0154 889 FunFam Nuclear pore complex protein NUP107 28 176 - -
Sed14g0154 889 Gene3D Phosphorylase Kinase; domain 1 574 686 - -
Sed14g0154 889 PANTHER LEUCINE RICH REPEAT KINASE 2 157 886 IPR051420 -
Sed14g0154 889 SUPERFAMILY L domain-like 65 223 - -
Sed14g0154 889 SUPERFAMILY Protein kinase-like (PK-like) 610 885 IPR011009 -
Sed14g0154 889 ProSiteProfiles Protein kinase domain profile. 608 889 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0154 889 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 225 520 - -
Sed14g0154 889 Pfam Leucine rich repeat 327 386 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 PRINTS Leucine-rich repeat signature 446 459 - -
Sed14g0154 889 PRINTS Leucine-rich repeat signature 352 365 - -
Sed14g0154 889 Pfam Protein tyrosine and serine/threonine kinase 612 882 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0154 889 Gene3D Ribonuclease Inhibitor 230 519 IPR032675 -
Sed14g0154 889 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 159 181 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 231 253 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 428 446 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 112 133 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Pfam Leucine Rich Repeat 448 470 IPR001611 GO:0005515(InterPro)
Sed14g0154 889 Gene3D Ribonuclease Inhibitor 27 168 IPR032675 -
Sed14g0154 889 SMART LRR_typ_2 373 397 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 446 469 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 325 349 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 109 132 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 157 181 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 133 156 IPR003591 -
Sed14g0154 889 SMART LRR_typ_2 205 229 IPR003591 -
Sed14g0154 889 Gene3D Ribonuclease Inhibitor 169 229 IPR032675 -
Sed14g0154 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 687 889 - -
Sed14g0154 889 ProSitePatterns Tyrosine protein kinases specific active-site signature. 731 743 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0154 889 SUPERFAMILY RNI-like 174 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2816 Sed-Chr7:43006919 Sed14g0154 Sed-Chr14:1793470 2.90E-53 dispersed
Sed14g0154 Sed-Chr14:1793470 Sed10g0775 Sed-Chr10:5481805 2.00E-51 dispersed
Sed14g0154 Sed-Chr14:1793470 Sed04g2038 Sed-Chr4:34766002 4.80E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80130 PF00069 Pkinase 4.30E-27 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0154 - - - 0.0