Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0157 ATGGGAACTCCGGAATTCCCTAATCTTGGAAAGCATTGCAGCTTTCAGGATTGTAGCCTCATCGATTTCTTGCCCTTTACTTGCGATTGCTGTCACCAGGTATTCTGTTTGGAGCATCGTGGCTACAATAGGCATAGTTGTCCAAAAGCGGATAAGTGGGATGTCACCGTTGTAATTTGTCCACTGTGTGCCAAAGGAGTTCGTCTTATTCCAGATCAAGACCCAAACATTACTTGGGAGATACATGTAAACACGGAATGTGATCCTTCAAATTATGAAAAAGTCACAAAGAAGAAAAAATGCCCTGTGCCAGGCTGCAGGGAGTTGTTAACATTTTCAAACACGATCAAGTGCCGAGACTGCTCGGTGGACCATTGTTTGAAGCACCGTTTTGGACCCGACCATAAGTGTTCTGGACCCAAAAAACCAGAACCAGCAGGGTTTCCATTTTCCAGCCTTTTTAGTAAAAGTAGAAAAGAAGAGAAGGGCCCTAAGAAAGCATTGTCCACCACATCTTCCTCTAGGTGGACTACAACTCTTCTTAATGCAGCCTCATCTGTTAAAGCTTCGGCCGAGGCAAGCATGACGAAAGTTTCAAATGAAATCAGCCAAGCTTGGAAAACATCAGGCAGCAGCAGCAACGGAAGCGCGAATGGCCAAGTTGAGCAATGTCCACAATGTGGTGCTAAGTTTTCTTCGGTTTTATCGTTAGTAGACCATGTCGAAAAAGTCCATGAAAAGGGTGGCAATCGATCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCAAAGTGTAGTAGAGGATTTGTCGATCCTGTTGCCCTTGTGGAGCATATTGAGAGGGATCATGGTGGTACTTCAAAAGCTTGA 870 44.94 MGTPEFPNLGKHCSFQDCSLIDFLPFTCDCCHQVFCLEHRGYNRHSCPKADKWDVTVVICPLCAKGVRLIPDQDPNITWEIHVNTECDPSNYEKVTKKKKCPVPGCRELLTFSNTIKCRDCSVDHCLKHRFGPDHKCSGPKKPEPAGFPFSSLFSKSRKEEKGPKKALSTTSSSRWTTTLLNAASSVKASAEASMTKVSNEISQAWKTSGSSSNGSANGQVEQCPQCGAKFSSVLSLVDHVEKVHEKGGNRSGAKKVVIDACPKCSRGFVDPVALVEHIERDHGGTSKA 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1810889 1816805 - Sed0027679.1 Sed14g0157 735875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0157 289 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 Gene3D - 81 149 IPR035896 -
Sed14g0157 289 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 ProSitePatterns Zinc finger C2H2 type domain signature. 262 283 IPR013087 -
Sed14g0157 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 222 245 IPR013087 -
Sed14g0157 289 Gene3D - 2 59 IPR035896 -
Sed14g0157 289 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 260 288 IPR013087 -
Sed14g0157 289 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270(InterPro)
Sed14g0157 289 Pfam C2H2-type zinc finger 223 245 - -
Sed14g0157 289 ProSitePatterns Zinc finger C2H2 type domain signature. 224 245 IPR013087 -
Sed14g0157 289 SUPERFAMILY AN1-like Zinc finger 93 145 IPR035896 -
Sed14g0157 289 Gene3D Classic Zinc Finger 185 288 - -
Sed14g0157 289 SMART c2h2final6 260 283 IPR013087 -
Sed14g0157 289 SMART c2h2final6 222 245 IPR013087 -
Sed14g0157 289 SUPERFAMILY AN1-like Zinc finger 4 60 IPR035896 -
Sed14g0157 289 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 249 - GO:0005737(PANTHER)
Sed14g0157 289 MobiDBLite consensus disorder prediction 148 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed08g1371 Sed-Chr8:28299783 Sed14g0157 Sed-Chr14:1810889 1.50E-32 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40521 PF01428 zf-AN1 4.30E-08 No_clan Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0157 - - - 0.0