Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0202 ATGGGAGACGGCAATAACACCAACAGAGGGCTTATCTCGGCCAACGCCGCCGCTAATTCCAACCGGAACAACAACAACAGCGGCGGAAGCCACAGTAAGAAGCCGGAGTGGCTGCAGCAGTACGATCTGATTGGGAAGATCGGTGAGGGAACGTATGGGCTTGTGTTTCTCGCGAAAATCAAACCCCCTTCGCCGAATCGCGGCAAGTCCATTGCCATCAAGAAGTTTAAGCAATCCAAGGACGGCGATGGCGTCTCCCCTACTGCCATCCGTGAAATTATGTTACTGCGGGAAATATCACACGAGAATGTCGTTAAGCTTGAAAATGTTCATATCAACCATGCAGATATGTCGCTGTATCTGGCTTTTGATTATGCTGAACATGACCTCTATGAAATCATTCGACATCATCGAGACAAGGCTAACAATCCCCTTACTCAGTACACTGTTAAATCCTTGCTTTGGCAACTTCTCAATGGATTGAACTATCTCCACAGTAATTGGATCATTCATCGAGATTTAAAGCCATCAAATATTTTGGTAATGGGTGAAGGAGAAGAGCAAGGACTGGTTAAAATTGCTGATTTTGGACTTGCAAGAATATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGAGTTGTCGTCACAATTTGGTATCGTGCACCTGAACTTCTCCTTGGAGCAAAGCACTATACTAGTGCTGTTGATATGTGGGCTGTTGGATGTATTTTTGCTGAGCTTTTGACGTTGAAGCCATTGTTTCAAGGGCAAGAGCTCAAAGGGACTCCAAATCCTTTCCAGCTTGATCAACTCGACAAGATTTTTAAGGTTTTAGGCCATCCCACACTAGAGAAGTGGCCAACACTTGCTAATCTTCCACACTGGCAACAAGATACACAGCACATACAGGGGCATAAATATGACAATGCTGGATTGTATAATGTTGTCCACCTTTCTCCAAAAAGTCCTGCATATGATCTTCTGGCCAAAATGCTCGAGTATGATCCTCGAAAGCGTATAACAGCAGCCCAGGCTCTTGAACATGAGTATTTTCGTTTAGACCCTCTTCCAGGAAGCAATGCTCTCGTACCAATCCAACCTGGAGAGAAGGTCATTAATTATCCAACTCGCCCAGTGGACACAACCACAGATTTTGACGGAACAACTAACATTCAACCCTCACAAACGGTACCATCTGGAAATGCTGTAAACATGCACGGTGTTCATGCGGTAGCTGGCAGATCCGTCTCTCGGTCAATGACAGGAGTTAGCATGCCAAGGTTGCCTCAGGGCATGGCTCCTTATAACCTTGCATCTCAGGCTGGGATGGGTATGAATCCCGGTGGCATCCCTATGCAGCGCGGCGTTTCTGCCCAAGCTCATCAGCAACAACAGTTAAGGAGAAAAGATCCAGGAATGGGAATGCCAGGTTATCCTCCACAGCAGAAACAACAAAGACGCTACTGA 1470 46.12 MGDGNNTNRGLISANAAANSNRNNNNSGGSHSKKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLENVHINHADMSLYLAFDYAEHDLYEIIRHHRDKANNPLTQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGLVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGQELKGTPNPFQLDQLDKIFKVLGHPTLEKWPTLANLPHWQQDTQHIQGHKYDNAGLYNVVHLSPKSPAYDLLAKMLEYDPRKRITAAQALEHEYFRLDPLPGSNALVPIQPGEKVINYPTRPVDTTTDFDGTTNIQPSQTVPSGNAVNMHGVHAVAGRSVSRSMTGVSMPRLPQGMAPYNLASQAGMGMNPGGIPMQRGVSAQAHQQQQLRRKDPGMGMPGYPPQQKQQRRY 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2270621 2298049 - Sed0026349.1 Sed14g0202 735920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0202 489 CDD STKc_CDK8_like 40 352 - -
Sed14g0202 489 Pfam Protein kinase domain 41 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0202 489 PANTHER CELL DIVISION PROTEIN KINASE 40 352 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0016592(PANTHER)
Sed14g0202 489 Gene3D Transferase(Phosphotransferase) domain 1 124 364 - -
Sed14g0202 489 ProSitePatterns Protein kinases ATP-binding region signature. 47 75 IPR017441 GO:0005524(InterPro)
Sed14g0202 489 FunFam Cyclin-dependent kinase e-1 29 125 - -
Sed14g0202 489 FunFam Putative cyclin-dependent kinase E-1 126 365 - -
Sed14g0202 489 ProSiteProfiles Protein kinase domain profile. 41 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0202 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0202 489 Gene3D Phosphorylase Kinase; domain 1 26 123 - -
Sed14g0202 489 SMART serkin_6 41 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0202 489 SUPERFAMILY Protein kinase-like (PK-like) 36 353 IPR011009 -
Sed14g0202 489 MobiDBLite consensus disorder prediction 446 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0202 Sed-Chr14:2270621 Sed14g0538 Sed-Chr14:5418258 5.40E-59 dispersed
Sed14g0202 Sed-Chr14:2270621 Sed03g2289 Sed-Chr3:17393806 3.20E-261 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80135 PF00069 Pkinase 7.00E-68 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0202 K02208 - csv:101203984 879.782