Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0203 | ATGTGGTCAAAGTCCGATAACAAACCCGCCGCCGGATCTGACCAGATGTATAGCAATTCATCAAAACTAGAAAACGATTCACACGGAGGAACAACGAAAGTAAACGCGAAAACCCCTCCAGAATCACTGAGAAGAATCGATCAAATAGCTAAAAACGGGAACCAGGAGACGATGAGTAGCAGCGGGGATAGTTACCGGTGCGAGAGCATGGAGAGCACGGGGATGGCAGTAAAGCCGCACACGGGGGGAGATGTGCGGTGGGACGCGGTGAACATGGTGTCGAGAGGGAGCCAGTTGAACCTGAGCCATTTCAGGCTGCTGAAGAGGCTGGGGTACGGGGACATTGGGAGCGTTTATTTGGTGGAATTGAGAGGGAGTGATGCGTATTTCGCGATGAAAGTGATGGATAAAGCATCGTTGGCGAGTAGGAATAAGCTGCTGAGGGCTCAAACGGAGAGGGAGATTTTGGGGCTTTTGGATCACCCGTTTTTGCCTACTTTGTATTCCTATTTCGAAACGGATAAGTTTTATTGTTTGGTTATGGAGTTTTGTAGCGGTGGGAATCTTCATTCCCTTCGTCAAAAACAACCAAACAAGTATTTTACTGAAGAAGCTGCCAGGTTCTATGCATCAGAAGTATTATTAGCATTGGAATATCTGCACATGTTAGGAATAGTGTACAGAGATTTGAAACCAGAGAACCTGTTGATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCCCTCCGCTGCTCCGTCAACCCCACCCTGGTCAAATCCTCCTCCGTCCACCCCGCCGCCGCCGCCACCGCCGCCTCCAACGGCGGCGCACCCGCCGGCATCCTCGACGAGGACTTCGCCGTCCACGGCTGTATGCAACCCTCCAACTTCCTCCCCCGCATCCTCCCTTCCAAGAAGAACCGCAAATCCAAATCCGACTTCGGCCTCTTCGTCGGCGGCGCGCTTCCGGAACTCATGGCGGAGCCGACCAACGTCCGATCCATGTCCTTCGTCGGCACGCACGAGTATCTGGCGCCGGAGATCGTCCAGGGCGAGGGCCACGGCAGCGCCGTCGACTGGTGGACGCTGGGGATCTTCCTCTACGAGCTTCTGCACGGAACCACGCCGTTCAAAGGATCCGGAAACCGAGCGACGCTGTTCAACGTCGTCGGACAGCCGCTCCGGTTCCCGGAGACGCCGGTGGCGAGTCCGGCGGCGCGGGATCTGATCCGAGGACTGCTTGTGAAGGAGCCGTCGAAGCGGATCGCGTACCGGCGAGGCGCTACGGAGATTAAACAGCATCCGTTCTTCGACGGCGTTAATTGGGCGTTGGTGAGGAGCGCTATGCCGCCGCACGTTCCTGAGCCGGTTGATTTCTCGCAGTACGCTAGTAAGAAGAGCGGCGGTCACGGCGGCGGCGGCGGCGGATTGGTGGAGGAGAAGAAGGCGGCGGAGGTAGCGGCGGAGAAATCTTCGGGTTCTAATGGTAACGATACCGAGGATTTTGAGTACTTTTAG | 1527 | 55.86 | MWSKSDNKPAAGSDQMYSNSSKLENDSHGGTTKVNAKTPPESLRRIDQIAKNGNQETMSSSGDSYRCESMESTGMAVKPHTGGDVRWDAVNMVSRGSQLNLSHFRLLKRLGYGDIGSVYLVELRGSDAYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVNPTLVKSSSVHPAAAATAASNGGAPAGILDEDFAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIVQGEGHGSAVDWWTLGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPETPVASPAARDLIRGLLVKEPSKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQYASKKSGGHGGGGGGLVEEKKAAEVAAEKSSGSNGNDTEDFEYF | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2300808 | 2304413 | - | Sed0020799.1 | Sed14g0203 | 735921 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0203 | 508 | Gene3D | Phosphorylase Kinase; domain 1 | 102 | 187 | - | - | |
Sed14g0203 | 508 | MobiDBLite | consensus disorder prediction | 463 | 508 | - | - | |
Sed14g0203 | 508 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Sed14g0203 | 508 | FunFam | Serine/threonine-protein kinase AGC1-7 | 333 | 458 | - | - | |
Sed14g0203 | 508 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 258 | - | - | |
Sed14g0203 | 508 | ProSiteProfiles | Protein kinase domain profile. | 104 | 440 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0203 | 508 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0203 | 508 | Pfam | Protein kinase domain | 105 | 255 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0203 | 508 | Pfam | Protein kinase domain | 334 | 440 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0203 | 508 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Sed14g0203 | 508 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 465 | IPR011009 | - | |
Sed14g0203 | 508 | PANTHER | FLIPPASE KINASE 1-RELATED | 33 | 482 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Sed14g0203 | 508 | FunFam | serine/threonine-protein kinase D6PK-like | 188 | 255 | - | - | |
Sed14g0203 | 508 | Gene3D | Transferase(Phosphotransferase) domain 1 | 316 | 458 | - | - | |
Sed14g0203 | 508 | SMART | serkin_6 | 104 | 440 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0203 | 508 | FunFam | Serine/threonine-protein kinase AGC1-5 | 102 | 187 | - | - | |
Sed14g0203 | 508 | CDD | STKc_phototropin_like | 102 | 461 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed07g0253 | Sed-Chr7:2016275 | Sed14g0203 | Sed-Chr14:2300808 | 2.40E-60 | dispersed | |
Sed14g0203 | Sed-Chr14:2300808 | Sed14g1270 | Sed-Chr14:21747693 | 3.00E-145 | dispersed | |
Sed07g0888 | Sed-Chr7:6408932 | Sed14g0203 | Sed-Chr14:2300808 | 2.30E-88 | transposed | |
Sed14g0203 | Sed-Chr14:2300808 | Sed03g2290 | Sed-Chr3:17431222 | 6.70E-222 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80136 | PF00069 | Pkinase | 5.60E-37 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0203 | - | - | - | 0.0 |