Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0203 ATGTGGTCAAAGTCCGATAACAAACCCGCCGCCGGATCTGACCAGATGTATAGCAATTCATCAAAACTAGAAAACGATTCACACGGAGGAACAACGAAAGTAAACGCGAAAACCCCTCCAGAATCACTGAGAAGAATCGATCAAATAGCTAAAAACGGGAACCAGGAGACGATGAGTAGCAGCGGGGATAGTTACCGGTGCGAGAGCATGGAGAGCACGGGGATGGCAGTAAAGCCGCACACGGGGGGAGATGTGCGGTGGGACGCGGTGAACATGGTGTCGAGAGGGAGCCAGTTGAACCTGAGCCATTTCAGGCTGCTGAAGAGGCTGGGGTACGGGGACATTGGGAGCGTTTATTTGGTGGAATTGAGAGGGAGTGATGCGTATTTCGCGATGAAAGTGATGGATAAAGCATCGTTGGCGAGTAGGAATAAGCTGCTGAGGGCTCAAACGGAGAGGGAGATTTTGGGGCTTTTGGATCACCCGTTTTTGCCTACTTTGTATTCCTATTTCGAAACGGATAAGTTTTATTGTTTGGTTATGGAGTTTTGTAGCGGTGGGAATCTTCATTCCCTTCGTCAAAAACAACCAAACAAGTATTTTACTGAAGAAGCTGCCAGGTTCTATGCATCAGAAGTATTATTAGCATTGGAATATCTGCACATGTTAGGAATAGTGTACAGAGATTTGAAACCAGAGAACCTGTTGATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCCCTCCGCTGCTCCGTCAACCCCACCCTGGTCAAATCCTCCTCCGTCCACCCCGCCGCCGCCGCCACCGCCGCCTCCAACGGCGGCGCACCCGCCGGCATCCTCGACGAGGACTTCGCCGTCCACGGCTGTATGCAACCCTCCAACTTCCTCCCCCGCATCCTCCCTTCCAAGAAGAACCGCAAATCCAAATCCGACTTCGGCCTCTTCGTCGGCGGCGCGCTTCCGGAACTCATGGCGGAGCCGACCAACGTCCGATCCATGTCCTTCGTCGGCACGCACGAGTATCTGGCGCCGGAGATCGTCCAGGGCGAGGGCCACGGCAGCGCCGTCGACTGGTGGACGCTGGGGATCTTCCTCTACGAGCTTCTGCACGGAACCACGCCGTTCAAAGGATCCGGAAACCGAGCGACGCTGTTCAACGTCGTCGGACAGCCGCTCCGGTTCCCGGAGACGCCGGTGGCGAGTCCGGCGGCGCGGGATCTGATCCGAGGACTGCTTGTGAAGGAGCCGTCGAAGCGGATCGCGTACCGGCGAGGCGCTACGGAGATTAAACAGCATCCGTTCTTCGACGGCGTTAATTGGGCGTTGGTGAGGAGCGCTATGCCGCCGCACGTTCCTGAGCCGGTTGATTTCTCGCAGTACGCTAGTAAGAAGAGCGGCGGTCACGGCGGCGGCGGCGGCGGATTGGTGGAGGAGAAGAAGGCGGCGGAGGTAGCGGCGGAGAAATCTTCGGGTTCTAATGGTAACGATACCGAGGATTTTGAGTACTTTTAG 1527 55.86 MWSKSDNKPAAGSDQMYSNSSKLENDSHGGTTKVNAKTPPESLRRIDQIAKNGNQETMSSSGDSYRCESMESTGMAVKPHTGGDVRWDAVNMVSRGSQLNLSHFRLLKRLGYGDIGSVYLVELRGSDAYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVNPTLVKSSSVHPAAAATAASNGGAPAGILDEDFAVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGALPELMAEPTNVRSMSFVGTHEYLAPEIVQGEGHGSAVDWWTLGIFLYELLHGTTPFKGSGNRATLFNVVGQPLRFPETPVASPAARDLIRGLLVKEPSKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQYASKKSGGHGGGGGGLVEEKKAAEVAAEKSSGSNGNDTEDFEYF 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2300808 2304413 - Sed0020799.1 Sed14g0203 735921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0203 508 Gene3D Phosphorylase Kinase; domain 1 102 187 - -
Sed14g0203 508 MobiDBLite consensus disorder prediction 463 508 - -
Sed14g0203 508 MobiDBLite consensus disorder prediction 1 44 - -
Sed14g0203 508 FunFam Serine/threonine-protein kinase AGC1-7 333 458 - -
Sed14g0203 508 Gene3D Transferase(Phosphotransferase) domain 1 188 258 - -
Sed14g0203 508 ProSiteProfiles Protein kinase domain profile. 104 440 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0203 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0203 508 Pfam Protein kinase domain 105 255 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0203 508 Pfam Protein kinase domain 334 440 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0203 508 MobiDBLite consensus disorder prediction 1 38 - -
Sed14g0203 508 SUPERFAMILY Protein kinase-like (PK-like) 101 465 IPR011009 -
Sed14g0203 508 PANTHER FLIPPASE KINASE 1-RELATED 33 482 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Sed14g0203 508 FunFam serine/threonine-protein kinase D6PK-like 188 255 - -
Sed14g0203 508 Gene3D Transferase(Phosphotransferase) domain 1 316 458 - -
Sed14g0203 508 SMART serkin_6 104 440 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0203 508 FunFam Serine/threonine-protein kinase AGC1-5 102 187 - -
Sed14g0203 508 CDD STKc_phototropin_like 102 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0253 Sed-Chr7:2016275 Sed14g0203 Sed-Chr14:2300808 2.40E-60 dispersed
Sed14g0203 Sed-Chr14:2300808 Sed14g1270 Sed-Chr14:21747693 3.00E-145 dispersed
Sed07g0888 Sed-Chr7:6408932 Sed14g0203 Sed-Chr14:2300808 2.30E-88 transposed
Sed14g0203 Sed-Chr14:2300808 Sed03g2290 Sed-Chr3:17431222 6.70E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80136 PF00069 Pkinase 5.60E-37 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0203 - - - 0.0