Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0208 ATGGACACTGCTGGTCGACTCATTGCTGGCTCTCACAATAGAAATGAATTTGTTCTCATCAATGCCGACGACATTGCTCGGATCAAGTATGTGAAGGACTTTAGTGGGCAAACATGTAGGATTTGTGGAGATGAGGTTGAGTTAACAGCTGAGGGAGAGCTCTTTGTTGCCTGTAATGAATGTGCCTTCCCAGTTTGTAGACCTTGCTATGAGTATGAGAGAAGAGAGGGAAATCAAGCTTGTCCACAGTGTAAAACCAGATACAAGCGAATTAAAGGTAGTCCTAGGGTGGAGGGTGATGAGGATGAAGATGGTATTGACGATTTGGATAACGAGTTCGACTATGGAAACCTCGATGCTGCCGAGGCATCGTTTGGTTCACAACTTTATGCTGGCCGCCGTTTCCACCCAAATGCATCTCATATCCCTGGACAATCAGAGCATGAACCTTCTCCTCTTGGTTCTGAAATTCCACTCTTGACATACGGCGAGGAGGATTATGAGATGTCTTCTGATCAACATGCTCTTGTACCCCACTTTATGGGTTATGACAACAGAGTCCATCCAATGCCTTACTCTGATCCATCAATACCATCTCAACCTAGGCCAATGGTTCCCCAGAAAGATACTGCGGTGTATGGTTATGGGAGTGTGGCTTGGAAAGACAGAATGGAGGATTGGAAGAAGAAGCAAAATGATAAACTTCAAGTGGTGAAGCACCAAGGGGTTGACAGTGGTGGTAGTGATATCGATGATCCTGATTTGCCCATGATGGATGAAGCTAGGCAACCATTATCAAGGAAATTGCCCATCTCTTCAAGCAGGATAAATCCTTACAGATTAATCATCATGCTTCGTCTTGTTATTCTCGGCCTGTTTTTCCATTACCGAATTCTTCATCCAGTTAAAGATGCCTATGGCCTGTGGTTGACTTCAGTCATATGTGAAATATGGTTTGCTACTTCTTGGATTCTGGATCAGTTCCCAAAATGGTGTCCAATTGAAAGGGAAACGTATCTTGATAGGCTGTCACTGAGGTATGAAAAAGAAGGGAAACCTTCTGAATTAGCAAGCGTGGACGTATTTGTTAGTACCGTTGATCCAATGAAAGAACCTCCACTGATCACAGCCAACACAGTACTTTCCATTCTTGCAGTTGACTATCCAGTCGAGAAAGTTGCATGTTACGTCTCTGACGATGGTGCAGCCATGTTAACATTTGAAGCACTCTCTGAGACATCTGAATTTGCAAGGAAATGGGTTCCTTTCTGTAAGAAATTCAGTATTGAACCCCGTGCCCCGGAATTTTACTTCTCTCAGAAAATTGATTATTTGAAGAACAAGGTCCATCCGGCATTTGTCAGGGAAAGGCGAGCAATGAAGAGAGAATACGAAGAATTCAAGGTTAGGATAAATGCTTTGGCCTCCATGGCTCAAAAGGTTCCCGAGGATGGCTGGACAATGCAAGATGGTACTCCATGGCCTGGTAACAATGTTCGAGACCACCCCGGCATGATTCAGGTCTTCCTTGGCCAGAGTGGAGTTTGTGATGTTGAAGGAAATGAGCTACCACGTCTTGTTTATGTCTCTCGTGAAAAGCGGCCAGGGTTCGATCATCACAAGAAGGCCGGGGCCATGAATGCACTGGTTCGGGTCTCAGCAGTTCTGTCAAATGCTCCTTATATTCTTAATGTTGACTGTGACCACTACATTAACAATAGCAAGGCACTTAGAGAAGCTATGTGTTTCATGATGGATCCTACATCAGGAAAGAAAATTTGTTATGTGCAGTTTCCTCAAAGATTTGATGGGATTGATCGACACGATAGATATTCGAACCGGAATGTTGTGTTCTTTGATATTAACATGAAAGGGTTAGATGGACTACAAGGACCGATATATGTCGGCACGGGATGTGTTTTCCGGAGGGTTGCTCTCTATGGGTATGATGCTCCAGCCAAGAAGAAACCCCCAAGCAAAACATGTAACTGCTTGCCAAAATGGTGCTGCCTGTGTTTTGGGTCTAGAAGAAACAAGAAAGGAAAGGCCAAGAATGAGAAAAAGAAGACAAAGCACCGAGAAGCATCGAAACAAATCCACGCACTTGAGAATATCGAGGAGGGAATCGAAGAACTAAGCATAGAGAAAATGAATGTGTCCGAAATAAAGTTGGCGAAAAAATTTGGGCAATCTCCAGTGTTTGTTGCTTCGACAATGTCGGAAAATGGAGGAGTTTTCCTTGATGCGAGTGCTGCGTCACTCCTAAGAGAAGCCATTCAAGTCATCAGTTGTGGTTATGAAGATAAAACAGAATGGGGGAAAGAGGTTGGGTGGATTTATGGTTCGGTGACCGAAGATATCTTGACTGGATTTAAAATGCACTGTCATGGTTGGCGGTCGGTATACTGTATTCCCAAGAGACCTGCTTTTAAAGGGTCGGCTCCTATTAACCTCTCTGATCGTCTACACCAAGTTTTGCGGTGGGCTCTCGGATCTGTTGAGATATTCTTGAGCAAACACTGTCCTATCTGGTATGGCTATGGGGGAGGGTTGAAATGGCTGGAACGATTTTCGTACATAAACTCTGTGGTTTATCCGTGGACCTCGATTCCGTTGCTAGTTTATTGCAGTCTGCCAGCTATCTGTCTTCTCACTGGAAAATTTATTGTTCCTGAGATTAGCAACTATGCCAGTCTTATTTTCATGGCACTCTTCATTTCAATCGCTGCAACCGGTATCCTTGAGATGCAATGGGGTGGTGTCGGGATCGACGACTGGTGGAGAAACGAGCAGTTCTGGGTCATTGGAGGTGTTTCGTCGCATCTTTTTGCTCTCTTCCAAGGTCTACTCAAGGTTTTAGCCGGTGTCAGCACCAACTTCACAGTTACATCCAAAGCAGCCGATGATGGCGAATTTTCCGAACTCTATATCTTCAAGTGGACATCATTGTTAATACCTCCCACAACCTTGTTGATTATAAACGTTGTCGGCGTGATTGTCGGGATCTCTGAAGCCATCAATAATGGATACGATTCCTGGGGTCCGCTCTTCGGGAGGCTATTTTTCGCTCTTTGGGTGATCATCCACCTCTACCCGTTCTTGAAGGGATTGTTAGGGAAACAAGACAGGATACCAACCATCATTGTTGTTTGGTCCATTCTTTTAGCCTCAATCTTAACATTACTTTGGGTAAGGATCAATCCATTTGTATCCAGAGATGGTCCTGTTTTAGAAGTTTGCGGGTTGAATTGCGATTAG 3258 44.32 MDTAGRLIAGSHNRNEFVLINADDIARIKYVKDFSGQTCRICGDEVELTAEGELFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEDEDGIDDLDNEFDYGNLDAAEASFGSQLYAGRRFHPNASHIPGQSEHEPSPLGSEIPLLTYGEEDYEMSSDQHALVPHFMGYDNRVHPMPYSDPSIPSQPRPMVPQKDTAVYGYGSVAWKDRMEDWKKKQNDKLQVVKHQGVDSGGSDIDDPDLPMMDEARQPLSRKLPISSSRINPYRLIIMLRLVILGLFFHYRILHPVKDAYGLWLTSVICEIWFATSWILDQFPKWCPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKNKVHPAFVRERRAMKREYEEFKVRINALASMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGVCDVEGNELPRLVYVSREKRPGFDHHKKAGAMNALVRVSAVLSNAPYILNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRVALYGYDAPAKKKPPSKTCNCLPKWCCLCFGSRRNKKGKAKNEKKKTKHREASKQIHALENIEEGIEELSIEKMNVSEIKLAKKFGQSPVFVASTMSENGGVFLDASAASLLREAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSKHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASLIFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINVVGVIVGISEAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRIPTIIVVWSILLASILTLLWVRINPFVSRDGPVLEVCGLNCD 1085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2351148 2357638 + Sed0026791.1 Sed14g0208 735926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0208 1085 Coils Coil 685 722 - -
Sed14g0208 1085 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Sed14g0208 1085 FunFam Cellulose synthase 476 650 - -
Sed14g0208 1085 MobiDBLite consensus disorder prediction 136 157 - -
Sed14g0208 1085 SUPERFAMILY RING/U-box 27 111 - -
Sed14g0208 1085 FunFam Cellulose synthase 21 112 - -
Sed14g0208 1085 Pfam Zinc-binding RING-finger 30 105 IPR027934 -
Sed14g0208 1085 CDD mRING-HC-C4C4_CesA 37 87 - -
Sed14g0208 1085 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 271 1054 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Sed14g0208 1085 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Sed14g0208 1085 SUPERFAMILY Nucleotide-diphospho-sugar transferases 372 903 IPR029044 -
Sed14g0208 1085 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 651 IPR029044 -
Sed14g0208 1085 Pfam Cellulose synthase 359 1073 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1676 Sed-Chr10:33333406 Sed14g0208 Sed-Chr14:2351148 0.00E+00 dispersed
Sed11g1757 Sed-Chr11:32617670 Sed14g0208 Sed-Chr14:2351148 0.00E+00 dispersed
Sed12g2280 Sed-Chr12:33014775 Sed14g0208 Sed-Chr14:2351148 0.00E+00 dispersed
Sed13g0772 Sed-Chr13:5552799 Sed14g0208 Sed-Chr14:2351148 4.20E-100 dispersed
Sed14g0208 Sed-Chr14:2351148 Sed14g0899 Sed-Chr14:17857713 3.70E-44 dispersed
Sed10g0473 Sed-Chr10:3016469 Sed14g0208 Sed-Chr14:2351148 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0208 K10999 - csv:101211094 2070.82