Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0232 ATGCCTGCTTGGTGGGTAAGGAAATTCACTAAAAACAAGAACAATCCCACTAATTTTCTCACCTCTTCTTCTCCTAAAAGCGAGCCTGATAAGCCCAGGAGCTTCGATGAGCTCTCTCCTGTGAATTTCTCTCATCGTAGAGATAAGGGCTCTTCTGGGTTTGACTCTGATAATGGGGATTCTAGCCGCCCTCTTCCTCGACCTTCTATTTCTGCTCTTGGGTTTGATCTTGGACTTGGGAATGGATCTGGGTCTGTTTCGGTTTCGAGCAATAGCTCTTCTGAGTCTTTGGATGATCATCCATCTGCTCAAGAACACCTTCAAATTGGAGGGTACAGAGGATTTGCTGATACCAGAACAAAGGAGACAAGGCCGAGAAGTCCAGGTCCAGGATCAAGAGGACCGACCAGTCCTACATCGCCTCTCCACCCGCGTTTCTGTGGCACGAGTCTGGAGTCTCCTACCAATGGGAACAAACGGTGTTATAAGCTGCCACTTCCTCCAAGCTCCCCTACCAGCCCTTCTTCGTTGACCAGCGCCAAAACTACCAGTGTTGGTGATAACAACGCTGCTTTACAGTCGAAGTGGAAGAAAGGAAGGCTTCTAGGAAGGGGAACATTTGGTCATGTTTATCTTGGATTTAGCAGTGTAAGTGGCCAAATGTGTGCAATTAAAGAGGTGAAGAACATAAGTGACGACTCGACATCAAAAGAATGTCTGAAGCAATTGAATCAGGAGATAACTGTGCTCAGCCAGCTATCCCATCCAAACATCGTCCGGTACTATGGTAGTGAAATGGGTGAAGAAACGCTCTCGGTGTACTTAGAATATGTCTCTGGTGGCTCAATCCACAAACTACTGCAAGAATACGGCGCCTTCAAGGAACCCGTTATAAAAAATTATACCCGAAAGATTCTTTCCGGTCTTGCATATCTGCATGGGAGAAATACAGCGCATAGGGACATAAAAGGAGCAAATATCTTAGTCGATCCAAATGGCGAGGTCAAGTTGGTAGACTTTGGCATGGCAAAACATCAAACAAATTGTACTTCGATGCTTTCTTTCAAAGGCAGCCCTTATTGGATGGCCCCTGAGGTTGTAATGAATACAAATGGCTACAGTATTGCGGTAGATATTTGGAGTTTAGGGTGTACGGTCCTCGAAATGGCAACGTCTAAACCGCCATGGAGCCAATACGAAGGGGTAGCTGCCATATTCAAAATTGGAAACAGCAAAGACATTCCTGAAATTCCAGATCATCTCTCCTATGATGCTAAAAATTTTGTGCAATTATGCTTACAACGGGATCCATCTGTACGTCCGTCGGCTGCCGAACTACTCGATCACCCTTTTGTTCAAGATGCAGTAACACCAAGAGCATCTGATTTCAACTTTCCCATGGATGCATTTCTCTTTAGCTTTGATGGAAGCCAGACTCCCCCATTGTTAGATCGGCATCCAAACAGAAAAAGTATAAGCATATGTGATGGAGAGTACGTGACGAACCCGACAATCTCTTCCAGAGCTCCGAGAAGTCCAAGGGGAAATGCAAGATTGATCACATCCTTGCCTGTCTCTCCATGTTCGAGTCCATTACGTTCGTATGGCCCCGCACACCAGAGTTGCTATCTTTCACCACCTCGCACATCTTACATGGGAATGGGTCAAACCAGTTACAACTTGAATGCATACGCTTATAACTCGAGACCGAACACATCGTTCACCCTCAACCCTGTACAAGATTCATCCATATTGAAAGTACAGACTCACTGTGGATCACCAAGAAGGCTTCTTTAA 1797 45.58 MPAWWVRKFTKNKNNPTNFLTSSSPKSEPDKPRSFDELSPVNFSHRRDKGSSGFDSDNGDSSRPLPRPSISALGFDLGLGNGSGSVSVSSNSSSESLDDHPSAQEHLQIGGYRGFADTRTKETRPRSPGPGSRGPTSPTSPLHPRFCGTSLESPTNGNKRCYKLPLPPSSPTSPSSLTSAKTTSVGDNNAALQSKWKKGRLLGRGTFGHVYLGFSSVSGQMCAIKEVKNISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIKNYTRKILSGLAYLHGRNTAHRDIKGANILVDPNGEVKLVDFGMAKHQTNCTSMLSFKGSPYWMAPEVVMNTNGYSIAVDIWSLGCTVLEMATSKPPWSQYEGVAAIFKIGNSKDIPEIPDHLSYDAKNFVQLCLQRDPSVRPSAAELLDHPFVQDAVTPRASDFNFPMDAFLFSFDGSQTPPLLDRHPNRKSISICDGEYVTNPTISSRAPRSPRGNARLITSLPVSPCSSPLRSYGPAHQSCYLSPPRTSYMGMGQTSYNLNAYAYNSRPNTSFTLNPVQDSSILKVQTHCGSPRRLL 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2566224 2570183 + Sed0027791.1 Sed14g0232 735950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0232 598 Pfam Protein kinase domain 197 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0232 598 MobiDBLite consensus disorder prediction 173 187 - -
Sed14g0232 598 MobiDBLite consensus disorder prediction 138 157 - -
Sed14g0232 598 MobiDBLite consensus disorder prediction 10 28 - -
Sed14g0232 598 FunFam Mitogen-activated protein kinase kinase kinase 194 475 - -
Sed14g0232 598 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 459 IPR050538 -
Sed14g0232 598 SUPERFAMILY Protein kinase-like (PK-like) 194 541 IPR011009 -
Sed14g0232 598 MobiDBLite consensus disorder prediction 29 54 - -
Sed14g0232 598 MobiDBLite consensus disorder prediction 82 98 - -
Sed14g0232 598 CDD STKc_MEKK1_plant 195 452 - -
Sed14g0232 598 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524(InterPro)
Sed14g0232 598 Gene3D Transferase(Phosphotransferase) domain 1 192 467 - -
Sed14g0232 598 MobiDBLite consensus disorder prediction 9 187 - -
Sed14g0232 598 SMART serkin_6 196 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0232 598 ProSiteProfiles Protein kinase domain profile. 196 452 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g1017 Sed-Chr7:7384815 Sed14g0232 Sed-Chr14:2566224 4.40E-115 dispersed
Sed07g2041 Sed-Chr7:35534200 Sed14g0232 Sed-Chr14:2566224 8.50E-41 dispersed
Sed10g1070 Sed-Chr10:9861394 Sed14g0232 Sed-Chr14:2566224 1.40E-258 dispersed
Sed10g1071 Sed-Chr10:9861394 Sed14g0232 Sed-Chr14:2566224 8.80E-251 dispersed
Sed14g0232 Sed-Chr14:2566224 Sed05g0584 Sed-Chr5:4261825 5.80E-31 dispersed
Sed14g0232 Sed-Chr14:2566224 Sed13g0133 Sed-Chr13:862964 1.50E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80137 PF00069 Pkinase 9.50E-72 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0232 K04421 - csv:101203907 897.886