Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0271 ATGGGCAAATTCCATTTCCATGTATTGTCCGGAAAAGCAGAGAATAGATTGGGAGTGAAATTCCGAGCAAATTCCATCTCCGATCGCCGATCGCCGATCTCCGATCTCCGATCTCCGATGAAGGTTCCTCAGGCGATGGAAGTTCTGAGCGAGAGAGCCGCTCTTGTGAGAGAGTCACTGCAGAAGAGCCAGAGCGTTACCGAGAACATGGTCTCCATTCTCGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAGACCGCAATGCGCCCTACTCAGATAAGAACTCATTCCATCCGGACGGCGCACGAGAATATTGACAAGACATTGAAGACTGCAGAAAATATGCTAGCCCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGAGGACCACATGAGGACTTAGAAATGTACTTGGAAGCAATTGATCAACTACGAAGCACAAACCGCTTCTTTACTGGGAACAAAAATTTCAAAAATAATGATTCTATTGTTACCCATACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTGTTAACAAATTACAGTAAGCCAGTGGAACCCGAGCGTCTTTTCGATTGTCTCCCCAACTCTTTGCGTCCATCATCAGCAGCTTCGCATCAAGGTGATAGCAAAAAACATTCTGACCATCACAACAAAAGCTTAGAAGCTGGGATCTTCATTCCCGTAACTCTTATTCCTCCCCGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTGGCCGGCCATCAGCAGCAACTGGTTAGAATATACAGGGATACTCGCTCTTCAGTTTTAGAACAGAGTCTCAGGAGATTAGGTGTTGAGAGGCTTAGCAAGGATGATGTCCAAAAAATGCAATGGGAGTCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAACTGCTGTTTGCTGGGGAAAGGAAAATCGTTGATCAAATATTTGATCATGATGGTGCAAACTCTCTCCGGGATCAATGCTTTGGAGATGTGACCACAAACAGTGTGGCAGTGCTACTAAGCTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTCTAGACATGTATGAAATAATGCGAGAACTGCAATCTGAGATGGATACACTCTTTGGAAGTAAAGCATGCATTGAAATGCGAGATTCTGCATTGAGCTTAACACAGCGCCTTGCCGAGACAGCTCAAGAGACCTTCGTTGATTTTCAAGAAGCTGTAGAAAGAGATGCCACTAAAACTGCTGTTCTTGATGGGACTGTTCATCCATTGACTAGTTATGTGATAAACTATATCAAGTTTTTATTTGACTACCAGTCTACTTTGAAGCAACTATTCCAAGGCTTTGACGCTGGTGATTCAGATGCTCAGTTAGCACTGATAACTACAAGAATTACGCAGGCCCTTCAGACTAATCTTGATGGAAAATCTAAGCAATATAAGGATCCTGCATTAACTCAGTTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATAGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTTCAGGCCTCAGGTGGTAGTTCGGGAGATGCTGGGAGTGGACTTTCAAAAGCTATGGTAAGAGATAGGTTTAAGACTTTTAACATCCAATTCGAAGAGCTTCATCAACGGCAATCGCAATGGACAGTTCCTGACAGTGAGTTAAGGGAGTCATTAAGGTTGGCAATTGCTGAAGTTTTGTTGCCTGCCTACCGATCCTTCATCAAGCGCTACGGGCCCATGATTGAGAGTGGGAAAAATTCTCAAAAATACATCAGATATTCACCCGAGGATCTTGAGCGTATGCTAAATGAACTTTTTGAGGGCAAGACATTCAATGAAGAAAAGCGCTAG 2028 43.79 MGKFHFHVLSGKAENRLGVKFRANSISDRRSPISDLRSPMKVPQAMEVLSERAALVRESLQKSQSVTENMVSILGSFDHRLSALETAMRPTQIRTHSIRTAHENIDKTLKTAENMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRFFTGNKNFKNNDSIVTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPERLFDCLPNSLRPSSAASHQGDSKKHSDHHNKSLEAGIFIPVTLIPPRVLPLLHDLAQQMILAGHQQQLVRIYRDTRSSVLEQSLRRLGVERLSKDDVQKMQWESLEAKIGNWIHYMRIAVKLLFAGERKIVDQIFDHDGANSLRDQCFGDVTTNSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEMDTLFGSKACIEMRDSALSLTQRLAETAQETFVDFQEAVERDATKTAVLDGTVHPLTSYVINYIKFLFDYQSTLKQLFQGFDAGDSDAQLALITTRITQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGGSSGDAGSGLSKAMVRDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAIAEVLLPAYRSFIKRYGPMIESGKNSQKYIRYSPEDLERMLNELFEGKTFNEEKR 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2835407 2845718 + Sed0026678.1 Sed14g0271 735989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0271 675 Gene3D Exocyst complex component Exo70 114 675 - -
Sed14g0271 675 Pfam Exocyst complex component Exo70 N-terminal 108 190 - -
Sed14g0271 675 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 668 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Sed14g0271 675 SUPERFAMILY Cullin repeat-like 115 666 IPR016159 -
Sed14g0271 675 Pfam Exo70 exocyst complex subunit C-terminal 310 663 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1977 Sed-Chr6:43901210 Sed14g0271 Sed-Chr14:2835407 3.20E-261 dispersed
Sed07g2172 Sed-Chr7:37253760 Sed14g0271 Sed-Chr14:2835407 8.20E-257 dispersed
Sed12g2505 Sed-Chr12:34551622 Sed14g0271 Sed-Chr14:2835407 2.70E-95 dispersed
Sed14g0271 Sed-Chr14:2835407 Sed14g0274 Sed-Chr14:2836449 0.00E+00 dispersed
Sed14g0271 Sed-Chr14:2835407 Sed14g0272 Sed-Chr14:2835407 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0271 K07195 - csv:105436019 1111.67