Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0272 ATGGGCAAATTCCATTTCCATGTATTGTCCGGAAAAGCAGAGAATAGATTGGGAGTGAAATTCCGAGCAAATTCCATCTCCGATCGCCGATCGCCGATCTCCGATCTCCGATCTCCGATGAAGGTTCCTCAGGCGATGGAAGTTCTGAGCGAGAGAGCCGCTCTTGTGAGAGAGTCACTGCAGAAGAGCCAGAGCGTTACCGAGAACATGGTCTCCATTCTCGGCTCCTTCGATCACCGTCTCTCCGCTCTCGAGACCGCAATGCGCCCTACTCAGATAAGAACTCATTCCATCCGGACGGCGCACGAGAATATTGACAAGACATTGAAGACTGCAGAAAATATGCTAGCCCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGAGGACCACATGAGGACTTAGAAATGTACTTGGAAGCAATTGATCAACTACGAAGCACAAACCGCTTCTTTACTGGGAACAAAAATTTCAAAAATAATGATTCTATTGTTACCCATACAAGCAACTTGCTTGTTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTGTTAACAAATTACAGTAAGCCAGTGGAACCCGAGCGTCTTTTCGATTGTCTCCCCAACTCTTTGCGTCCATCATCAGCAGCTTCGCATCAAGGTGATAGCAAAAAACATTCTGACCATCACAACAAAAGCTTAGAAGCTGGGATCTTCATTCCCGTAACTCTTATTCCTCCCCGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTGGCCGGCCATCAGCAGCAACTGGTTAGAATATACAGGGATACTCGCTCTTCAGTTTTAGAACAGAGTCTCAGGAGATTAGGTGTTGAGAGGCTTAGCAAGGATGATGTCCAAAAAATGCAATGGGAGTCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAACTGCTGTTTGCTGGGGAAAGGAAAATCGTTGATCAAATATTTGATCATGATGGTGCAAACTCTCTCCGGGATCAATGCTTTGGAGATGTGACCACAAACAGTGTGGCAGTGCTACTAAGCTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTCTAGACATGTATGAAATAATGCGAGAACTGCAATCTGAGATGGATACACTCTTTGGAAGTAAAGCATGCATTGAAATGCGAGATTCTGCATTGAGCTTAACACAGCGCCTTGCCGAGACAGCTCAAGAGACCTTCGTTGATTTTCAAGAAGCTGTAGAAAGAGATGCCACTAAAACTGCTGTTCTTGATGGGACTGTTCATCCATTGACTAGTTATGTGATAAACTATATCAAGTTTTTATTTGACTACCAGTCTACTTTGAAGCAACTATTCCAAGGCTTTGACGCTGGTGATTCAGATGCTCAGTTAGCACTGATAACTACAAGAATTACGCAGGCCCTTCAGACTAATCTTGATGGAAAATCTAAGCAATATAAGGATCCTGCATTAACTCAGTTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATAGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGGCCTCAGGTGGTAGTTCGGGAGATGCTGGGAGTGGACTTTCAAAAGCTATGGTAAGAGATAGGTTTAAGACTTTTAACATCCAATTCGAAGAGCTTCATCAACGGCAATCGCAATGGACAGTTCCTGACAGTGAGTTAAGGGAGTCATTAAGGTTGGCAATTGCTGAAGTTTTGTTGCCTGCCTACCGATCCTTCATCAAGCGCTACGGGCCCATGATTGAGAGTGGGAAAAATTCTCAAAAATACATCAGATATTCACCCGAGGATCTTGAGCGTATGCTAAATGAACTTTTTGAGGGCAAGACATTCAATGAAGAAAAGCGCTAG 2004 43.76 MGKFHFHVLSGKAENRLGVKFRANSISDRRSPISDLRSPMKVPQAMEVLSERAALVRESLQKSQSVTENMVSILGSFDHRLSALETAMRPTQIRTHSIRTAHENIDKTLKTAENMLAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRFFTGNKNFKNNDSIVTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPERLFDCLPNSLRPSSAASHQGDSKKHSDHHNKSLEAGIFIPVTLIPPRVLPLLHDLAQQMILAGHQQQLVRIYRDTRSSVLEQSLRRLGVERLSKDDVQKMQWESLEAKIGNWIHYMRIAVKLLFAGERKIVDQIFDHDGANSLRDQCFGDVTTNSVAVLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQSEMDTLFGSKACIEMRDSALSLTQRLAETAQETFVDFQEAVERDATKTAVLDGTVHPLTSYVINYIKFLFDYQSTLKQLFQGFDAGDSDAQLALITTRITQALQTNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKASGGSSGDAGSGLSKAMVRDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAIAEVLLPAYRSFIKRYGPMIESGKNSQKYIRYSPEDLERMLNELFEGKTFNEEKR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2835407 2845718 + Sed0026678.2 Sed14g0272 735990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0272 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 52 660 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Sed14g0272 667 Pfam Exocyst complex component Exo70 N-terminal 108 190 - -
Sed14g0272 667 Gene3D Exocyst complex component Exo70 114 667 - -
Sed14g0272 667 SUPERFAMILY Cullin repeat-like 115 658 IPR016159 -
Sed14g0272 667 Pfam Exo70 exocyst complex subunit C-terminal 310 655 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0272 Sed-Chr14:2835407 Sed14g0274 Sed-Chr14:2836449 0.00E+00 dispersed
Sed14g0271 Sed-Chr14:2835407 Sed14g0272 Sed-Chr14:2835407 0.00E+00 tandem
Sed14g0272 Sed-Chr14:2835407 Sed14g0273 Sed-Chr14:2836449 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0272 K07195 - csv:105436019 1091.26