Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0316 ATGGTTGATTTTTATGTTTGTGTGCTTCGATTTTTCTGGATTTGGATTTTCTCTTCTAGATCGTTAAATTTAGGGTTTACTTTTCCAGATCTGTTGAACTTCCATCGAAAACTTCGCGATTCGTTCTCGCAGAGGTTGAGATTCGTTGTTATGGCGGAAGAACACAGATGCCAAGCACCGGAAGGTCACCGTCTCTGCGCCAATAACTGCGGCTTCTTCGGCAGCCCAGCCACCATGGATCTCTGCTCCAAATGTTACAGAGACATTCGCCTCAAGGAACAAGAACAAGCCTCCACCAAATCCACCATTGAAGCCGCTCTCTCAGCTTCCTCTTCTTCCCCTTCCTCTTCTTCCCCCATCGATCCTCCTCCTCCTGTTTCCCCTGTCGTAATCTTGTCCTCGCCGCCGTCGCCGGACTCAGATCTGACCAACCCGCCTCCGCTTGCAGCGGCGAACCCGAACCCGAACCCGATTCCGAACCCGAACCGGTGTTCTTCCTGCCGCAAGAAGGTTGGTCTGACCGGGTTCCGATGCAGATGCGGAACCACGTTCTGTGGAGCTCATAGGTATCCGGAGAAACACGGCTGCACCTTCGATTTCAAGTCGATCGGAAGAGATGAGATCGCTCGAGCGAATCCGGTCGTGAAAGCCGATAAACTGGAGAGGATTTGA 672 51.93 MVDFYVCVLRFFWIWIFSSRSLNLGFTFPDLLNFHRKLRDSFSQRLRFVVMAEEHRCQAPEGHRLCANNCGFFGSPATMDLCSKCYRDIRLKEQEQASTKSTIEAALSASSSSPSSSSPIDPPPPVSPVVILSSPPSPDSDLTNPPPLAAANPNPNPIPNPNRCSSCRKKVGLTGFRCRCGTTFCGAHRYPEKHGCTFDFKSIGRDEIARANPVVKADKLERI 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3264076 3266275 - Sed0004982.4 Sed14g0316 736034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0316 223 MobiDBLite consensus disorder prediction 100 161 - -
Sed14g0316 223 SMART AN1_Zf_4 164 201 IPR000058 GO:0008270(InterPro)
Sed14g0316 223 ProSiteProfiles Zinc finger AN1-type profile. 158 204 IPR000058 GO:0008270(InterPro)
Sed14g0316 223 Gene3D - 50 120 - -
Sed14g0316 223 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 65 108 - -
Sed14g0316 223 SMART A20_3 63 87 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Sed14g0316 223 ProSiteProfiles Zinc finger A20-type profile. 60 94 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Sed14g0316 223 FunFam Zinc finger AN1-type containing 6 140 219 - -
Sed14g0316 223 Pfam A20-like zinc finger 64 87 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Sed14g0316 223 Gene3D - 138 219 IPR035896 -
Sed14g0316 223 MobiDBLite consensus disorder prediction 100 116 - -
Sed14g0316 223 MobiDBLite consensus disorder prediction 117 132 - -
Sed14g0316 223 SUPERFAMILY AN1-like Zinc finger 153 218 IPR035896 -
Sed14g0316 223 PANTHER AN1-TYPE ZINC FINGER PROTEIN 61 223 IPR050652 -
Sed14g0316 223 MobiDBLite consensus disorder prediction 139 160 - -
Sed14g0316 223 Pfam AN1-like Zinc finger 164 200 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0314 Sed-Chr14:3264076 Sed14g0316 Sed-Chr14:3264076 2.50E-80 dispersed
Sed14g0315 Sed-Chr14:3264076 Sed14g0316 Sed-Chr14:3264076 2.50E-80 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0316 - - - 0.0