Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0325 | ATGGGATCTGGTACTTGCGAAATTGTTGAAGCAAGGGAAGAAATCAAACCTGTTCAAAGTAAGATAGTATCTCGTCATTCAGATTTTGTATCAGACAAAGATCGTAAACTTTCTGCATTGAAACATGGATTCAAGGGATCTCTAAATGATGATATCAATCTGCTTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGTTTAGGTCATTCACAAGTAGAGGTAAATGCACTGAGAAAAAGTACACTTAAGAAGCCAATAACTGTAGGCATACCTCGCTCACCAGGTATCGGTACTTCTGAATCCGGTACTCTAAAGCAAGCACTCAGGGAACTTTGCCTTTCAAAGGCATCCGAAATGGCTGCTATCAAAAGATCATCAAAATCGGCTAGCTCTTCAAGACTCTCGGAAGCTGGGCGGATCAAGACGTTGTACAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCCTCAGATAATGGTAAGGGAGGGCGCGTGGTTGAAATATCTCTGGTTCCTGAGGAAAAAACATTGAAATTTGAAAAGAGACTTGAGCACAACCAGGTATCTGCTATTAAATCACCCGCTGAAACTGCTCGTTCTTCTCCTCAATTACCAACTGCAACAATGCAAAATTCTGTTGAGGTTGTTATTGTTGAAACAACCGCCAATACCACTTTGGCGAGGAAAGTTGGGTCTCAAACATTGAAGGCAGAGTTGGAGAAGGAAGAGGAGTCCATTACGCCGCCATCTATATCTTCATGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAACTCTGGCCTCGAGCAGGGTAGCAAATAAAGTATCATCATCCAAGGCAGTTAGGAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAAGTAAGTTAACTAGAAGTAACTCCCGTTCCGTCAAACCAGTTAGTAGGAACAAAGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGCAGTTCAAGCACATACAATGCAGTCAATAGTGATATGGATCCTAGTAAAAAGAAATTGATATGCGAGAGGTGCCACTGTGCATTGAATAGTGAAGCGAAAGACTCAAAGAAGGGATCTGCATCTCAGTTCAGTGGTCTTGGTACCGATGTAAACATGGCTAGTGCAAAATCTGGTGTTAACAAATCAGGCATCAACGCGGAAGGCAAGGCTTCTGATGCTAGAGTAAAAAAAAATACAAGGGTACGCGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACGAGTATTATAAGTGATGACAGCAATGGGCATGGATCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCGCAATTGCAGCATGGGGTCCTCAGCTTAAGGCATTTCAATCTTTTAAAGAAGCTTGGTTGTGGGGATATCGGAACCGTGTATCTCGCTGAGCTAACTGGCACTAATTGCTTATTTGCCATTAAGGTCATGGACAATGAGTTTTTAGCAAGACGGAAGAAAATGCCTAGAGCACAAACTGAGAGAGAAATATTGAGAATGCTAGATCATCCATTTCTCCCTACACTGTATGTTCAGTTCACTTCAGATAACCTATCATGTCTTGTCATGGAGTATTGTCCTGGGGGCGATCTTCATGTTCTACGGCAGAAACAGCTATGCAGAGTTTTTCCTGAACCTGCAGCAAGATTTTATGTTGCTGAGGTTCTCCTTGCTCTGGAGTACTTGCACATGCTTGGAGTTATTTATAGAGATTTAAAACCTGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACTGACTTCGACCTGTCGCTTAGGTGCACGGTCAGTCCAACACTCCTGAAGTCATCATCCTTCAATGCAGACTTGCCCAAAACATCAGGTCCATGTACAGATTCTAGTTGTGCTGAGCCGTTTTGCATTGAGCCATCATGTCAAGTCCCATGCTTCAGCCCAAGGTTTCTACCAGCTGCTTCCAAAACCAGAAAGTCAAAACCTGACCTCACAACACAGTTCAGGTCGTTGCCCCAGCTCATTGCCGAACCCACTGACGCACGATCCAACTCCTTCGTGGGGACTCATGAATATTTGGCTCCCGAGATCATTAAAGGCGAAGGCCATGGAGCCGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAGCTTCTGTATGGTAAAACCCCTTTCAAGGGTTCCAATAATGACGAAACATTGGCCAATGTAGTATTGCAGGGCCTCAGTTTTCCAGACAGCCCAATCGTTAGTTTCCAAGCAAGAGATCTAATCAGAGGGTTGTTAGTAAAAGAACCCGAAAACCGATTCGGGACAGAGAAAGGGGCTGCGGAAATCAAACAGCACCCATTCTTCGAGGGGCTAAACTGGGCATTGATCCGATGTGCGATTCCTCCCGAAGTTCCCGACTTATGCGATATGGACATTCCAAGCATGATTTCGCAACAAAACAAGTTCAGGTACTTGGAAAGCAAGTCCACGGGAGAGCACTTGGAGTTCGAATTGTTTTAG | 2607 | 43.61 | MGSGTCEIVEAREEIKPVQSKIVSRHSDFVSDKDRKLSALKHGFKGSLNDDINLLFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGTSESGTLKQALRELCLSKASEMAAIKRSSKSASSSRLSEAGRIKTLYNSVMVEATESGSSSDNGKGGRVVEISLVPEEKTLKFEKRLEHNQVSAIKSPAETARSSPQLPTATMQNSVEVVIVETTANTTLARKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKTLASSRVANKVSSSKAVRKGRLQTASSSKLGSGNKVSKLTRSNSRSVKPVSRNKGLAKKKVKQDLSSPTCSSSTYNAVNSDMDPSKKKLICERCHCALNSEAKDSKKGSASQFSGLGTDVNMASAKSGVNKSGINAEGKASDARVKKNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGSSNGNRPHMSKDVRWEAIRHAQLQHGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLCRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSSSFNADLPKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAASKTRKSKPDLTTQFRSLPQLIAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGSNNDETLANVVLQGLSFPDSPIVSFQARDLIRGLLVKEPENRFGTEKGAAEIKQHPFFEGLNWALIRCAIPPEVPDLCDMDIPSMISQQNKFRYLESKSTGEHLEFELF | 868 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3333838 | 3339017 | + | Sed0001360.1 | Sed14g0325 | 736043 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0325 | 868 | CDD | STKc_phototropin_like | 482 | 838 | - | - | |
Sed14g0325 | 868 | Pfam | Protein kinase domain | 485 | 636 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0325 | 868 | Pfam | Protein kinase domain | 714 | 817 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 271 | 349 | - | - | |
Sed14g0325 | 868 | SMART | serkin_6 | 484 | 817 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0325 | 868 | ProSiteProfiles | Protein kinase domain profile. | 484 | 817 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 272 | 317 | - | - | |
Sed14g0325 | 868 | FunFam | serine/threonine-protein kinase D6PK-like | 712 | 835 | - | - | |
Sed14g0325 | 868 | Gene3D | Transferase(Phosphotransferase) domain 1 | 564 | 633 | - | - | |
Sed14g0325 | 868 | FunFam | Serine/threonine-protein kinase D6PK-like | 482 | 567 | - | - | |
Sed14g0325 | 868 | Gene3D | Transferase(Phosphotransferase) domain 1 | 710 | 835 | - | - | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 407 | 424 | - | - | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 331 | 348 | - | - | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 396 | 460 | - | - | |
Sed14g0325 | 868 | Gene3D | Phosphorylase Kinase; domain 1 | 482 | 563 | - | - | |
Sed14g0325 | 868 | MobiDBLite | consensus disorder prediction | 425 | 459 | - | - | |
Sed14g0325 | 868 | SUPERFAMILY | Protein kinase-like (PK-like) | 459 | 835 | IPR011009 | - | |
Sed14g0325 | 868 | PANTHER | FLIPPASE KINASE 1-RELATED | 311 | 842 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Sed14g0325 | 868 | FunFam | serine/threonine-protein kinase D6PK-like | 568 | 635 | - | - | |
Sed14g0325 | 868 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 605 | 617 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g3169 | Sed-Chr1:56994948 | Sed14g0325 | Sed-Chr14:3333838 | 1.50E-191 | dispersed | |
Sed10g1115 | Sed-Chr10:12766537 | Sed14g0325 | Sed-Chr14:3333838 | 0.00E+00 | dispersed | |
Sed14g0325 | Sed-Chr14:3333838 | Sed14g1270 | Sed-Chr14:21747693 | 2.80E-151 | dispersed | |
Sed01g3168 | Sed-Chr1:56994948 | Sed14g0325 | Sed-Chr14:3333838 | 5.10E-198 | wgd | |
Sed10g1114 | Sed-Chr10:12766537 | Sed14g0325 | Sed-Chr14:3333838 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80138 | PF00069 | Pkinase | 5.50E-36 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0325 | - | - | - | 0.0 |