Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0330 ATGGAAATGCCTGGAAGGAGGTCAGATTACACGCTTCTGAGTCAAACTCCGGACGAGGAATCCTTACCAGCCGACGGAATCGATAACAAAGGGATGAACACTCAGGCGAATCGGATAGGGAACGTGTATCCATGGATTGGATTGCAGAGGCATTCTAGTGGAAGTAGCTACGATGATAGCTCTCTCTCCAGCGATTGCTACGCTCCTACGCTCTCGAATCCACCGCCGAATGAGATTGATGTGTTCGGAAGTGGGGGATGGTCGGCGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTGGCTTTGATTCTCAGGCTTTCTTCAGACGCGTCCTGTGCTGATGATCTCAATTTTGTGGATCCGATGCCGGACGAGAGAGTTCGAAGATCGTTTTCGAGTTCAGCAGAGGCTGTATCGCATCGATTTTGGGTAAATGGATGCATGTCGTACTTTGAGAAAGTGCCAGATGGTTTTTATCTAATTCATGGGATGGACCCCTACGTGTGGTCTTTATGCTCCAATCTGCAAGAGGATGGCCGTATTCCATCATTTGAATCTTTGAAGACAGTTGATTCCAGCATTGGTTCATCGATTGAAGTAGTTTTGATAGATCAACGTAGTGATGCTAGTTTAAAAGAATTGCTAAACAGAGTGCATAATATTTCTTTGAGCTGTATAACCCCGAAAGAGGTTGCAGACCATTTAGCGAAGTTGGTGTGCAATCACATGGGGGGTTCAGTTTCTGAGGGAGAAGATGACTTGATTTCCTCCTGGAGGGAATGCAGCGATGACTTAAAAGAATGTTTGGGATCTATCGTGATTCCATTATGCAGCTTATCTGCTGGCCTTTGCAGACACCGTGCTCTTTTATTCAAAGTGCTAGCTGATTCAATTGATTTGCCGTGTCGAATTGCCAAGGGCTGTAAGTATTGCACTAGAGATGATGCTTCATCTTGCCTCGTTAGATTCGGTCGTGATAGGGAATATCTCATTGATTTGATTGGGAAGCCAGGTTGCTTATGCAAACCTGATTCATTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGAGTACAACCTATTGAATCTACCATTGATTTCAGGTCACTGGCCAACCAGTATTTCTTGGATAGTCAATCACTTAATAGTGTATTTGATGAAGCTTCTTCAGGGAATGTTGTGTCTGGGAAGGATGTCGAATCCTCTGCCTATCAAAGACCATTCATTAGGAATGATGTACATGGTAAAAACACAGTGCTTACTGGTGACGGTGATAGAAGTTCTCAGTTATTGAATCCAAAAGTCTCTAAACTAAGTGCTCAAGATGGAAAGTCTGAGCAATTTAGATTATGTGATACTTCTCAATATACTGTACCATCTGCGCCTCTTGTAGAACATGTAGCCCCCTTAAACCAGATTGCAATGATTGGTTCCAAAGATTCTGAGCCTCTCTTAGCATTGTCTCATTTAAGGATGGATCCTGCTAGCAATTTATCATTCATTGAGGGGAGCCAACCAGTTAAAAACCCAAGTGAACTTTCCCTTGGCTTAGAAGATTTGGTTATTCCTTGGAAAGATCTTGTTTTGAGGGAGAAAATCGGCTCAGGTTCTTTTGGGACTGTATACCATGCTGATTGGCACGGATCTGATGTTGCGGTGAAGATTTTAATGGAACAAGACCTACATGTTGAGCGTTTTGAAGAATTTCTTAGGGAGGTTGCCATAATGAAATCTTTACGTCATCCGCACATTGTTCTCTTTATGGGTGCAGTCACTGAGCCTCCTAACTTGTCCATTGTCACGGAATACTTATCGAGAGGTAGCATGAACAATCTTTTGCATAGACATGGAGCAAGAGAAGTATTAGATGAGAGACGTCGGTTAAACATGGCATATGATGTTGCAAAGGGAATGAATTATCTTCACAAACGTAACCCACCAATTGTTCATCGTGATTTGAAATCTCCAAATCTTTTGGTTGATAAGAAGTACACAGTTAAGGTTTGCGATTTTGGGCTCTCACGCTTGAAGGCACACACATATCTTTCTTCAAAATCAGCTGCTGGGACTCCTGAATGGATGGCACCAGAAGTTCTCCGCGATGAGCCATCAAATGAGAAATCAGATGTTTATAGCTTTGGTGTGATACTGTGGGAACTTGCTACGTTGCAGCAGCCATGGGGCAACTTGAACGCAGCGCAGGTTGTGGCAGCCGTTGGCTTTAAAGGCAAAAGGCTTGAGATCCCATGCGATTTAAACCCTCGAGTTGCTACTATTATAGAGGCTTGCTTTGCCAGTGAGCCCTGGAAGCGTCCATCCTTTTATGAAATAATGGGATCTTTGAAGCCATTGATCAAACCTTCTACGCCTCATCATATTCGCTCAAACGCATCATTAGTTGCTCGATGA 2439 43.71 MEMPGRRSDYTLLSQTPDEESLPADGIDNKGMNTQANRIGNVYPWIGLQRHSSGSSYDDSSLSSDCYAPTLSNPPPNEIDVFGSGGWSAKSWAQQTEESYQLQLALILRLSSDASCADDLNFVDPMPDERVRRSFSSSAEAVSHRFWVNGCMSYFEKVPDGFYLIHGMDPYVWSLCSNLQEDGRIPSFESLKTVDSSIGSSIEVVLIDQRSDASLKELLNRVHNISLSCITPKEVADHLAKLVCNHMGGSVSEGEDDLISSWRECSDDLKECLGSIVIPLCSLSAGLCRHRALLFKVLADSIDLPCRIAKGCKYCTRDDASSCLVRFGRDREYLIDLIGKPGCLCKPDSLLNGPSSISISSPLRFPRVQPIESTIDFRSLANQYFLDSQSLNSVFDEASSGNVVSGKDVESSAYQRPFIRNDVHGKNTVLTGDGDRSSQLLNPKVSKLSAQDGKSEQFRLCDTSQYTVPSAPLVEHVAPLNQIAMIGSKDSEPLLALSHLRMDPASNLSFIEGSQPVKNPSELSLGLEDLVIPWKDLVLREKIGSGSFGTVYHADWHGSDVAVKILMEQDLHVERFEEFLREVAIMKSLRHPHIVLFMGAVTEPPNLSIVTEYLSRGSMNNLLHRHGAREVLDERRRLNMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAHTYLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNAAQVVAAVGFKGKRLEIPCDLNPRVATIIEACFASEPWKRPSFYEIMGSLKPLIKPSTPHHIRSNASLVAR 812
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3397525 3405887 - Sed0017165.1 Sed14g0330 736048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0330 812 PRINTS Tyrosine kinase catalytic domain signature 762 784 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 PRINTS Tyrosine kinase catalytic domain signature 699 709 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 PRINTS Tyrosine kinase catalytic domain signature 718 740 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 PRINTS Tyrosine kinase catalytic domain signature 652 670 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 PRINTS Tyrosine kinase catalytic domain signature 611 624 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 FunFam Serine/threonine-protein kinase CTR1 616 801 - -
Sed14g0330 812 Pfam Protein tyrosine and serine/threonine kinase 538 790 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 MobiDBLite consensus disorder prediction 1 31 - -
Sed14g0330 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 ProSitePatterns Protein kinases ATP-binding region signature. 543 564 IPR017441 GO:0005524(InterPro)
Sed14g0330 812 SUPERFAMILY Protein kinase-like (PK-like) 517 789 IPR011009 -
Sed14g0330 812 Gene3D Transferase(Phosphotransferase) domain 1 616 804 - -
Sed14g0330 812 SMART serkin_6 537 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 Gene3D Phosphorylase Kinase; domain 1 530 615 - -
Sed14g0330 812 CDD STKc_MAP3K-like 543 791 - -
Sed14g0330 812 PANTHER SERINE-THREONINE PROTEIN KINASE 124 792 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Sed14g0330 812 ProSiteProfiles Protein kinase domain profile. 537 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0330 812 FunFam Serine/threonine-protein kinase isoform 1 528 615 - -
Sed14g0330 812 Pfam Ethylene-responsive protein kinase Le-CTR1 139 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g1530 Sed-Chr13:20455131 Sed14g0330 Sed-Chr14:3397525 2.50E-163 dispersed
Sed13g1531 Sed-Chr13:20455131 Sed14g0330 Sed-Chr14:3397525 2.50E-163 dispersed
Sed13g1856 Sed-Chr13:23515876 Sed14g0330 Sed-Chr14:3397525 1.40E-113 dispersed
Sed14g0330 Sed-Chr14:3397525 Sed07g1367 Sed-Chr7:10390163 1.90E-29 dispersed
Sed14g0330 Sed-Chr14:3397525 Sed14g0331 Sed-Chr14:3397525 0.00E+00 tandem
Sed14g0330 Sed-Chr14:3397525 Sed02g0567 Sed-Chr2:43317856 2.10E-286 wgd
Sed14g0330 Sed-Chr14:3397525 Sed04g1447 Sed-Chr4:29042025 7.00E-290 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80139 PF07714 PK_Tyr_Ser-Thr 5.30E-70 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0330 K14510 - csv:101208800 1350.11