Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0331 | ATGGAAATGCCTGGAAGGAGGTCAGATTACACGCTTCTGAGTCAAACTCCGGACGAGGAATCCTTACCAGCCGACGGAATCGATAACAAAGGGATGAACACTCAGGCGAATCGGATAGGGAACGTGTATCCATGGATTGGATTGCAGAGGCATTCTAGTGGAAGTAGCTACGATGATAGCTCTCTCTCCAGCGATTGCTACGCTCCTACGCTCTCGAATCCACCGCCGAATGAGATTGATGTGTTCGGAAGTGGGGGATGGTCGGCGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTGGCTTTGATTCTCAGGCTTTCTTCAGACGCGTCCTGTGCTGATGATCTCAATTTTGTGGATCCGATGCCGGACGAGAGAGTTCGAAGATCGTTTTCGAGTTCAGCAGAGGCTGTATCGCATCGATTTTGGGTAAATGGATGCATGTCGTACTTTGAGAAAGTGCCAGATGGTTTTTATCTAATTCATGGGATGGACCCCTACGTGTGGTCTTTATGCTCCAATCTGCAAGAGGATGGCCGTATTCCATCATTTGAATCTTTGAAGACAGTTGATTCCAGCATTGGTTCATCGATTGAAGTAGTTTTGATAGATCAACGTAGTGATGCTAGTTTAAAAGAATTGCTAAACAGAGTGCATAATATTTCTTTGAGCTGTATAACCCCGAAAGAGGTTGCAGACCATTTAGCGAAGTTGGTGTGCAATCACATGGGGGGTTCAGTTTCTGAGGGAGAAGATGACTTGATTTCCTCCTGGAGGGAATGCAGCGATGACTTAAAAGAATGTTTGGGATCTATCGTGATTCCATTATGCAGCTTATCTGCTGGCCTTTGCAGACACCGTGCTCTTTTATTCAAAGTGCTAGCTGATTCAATTGATTTGCCGTGTCGAATTGCCAAGGGCTGTAAGTATTGCACTAGAGATGATGCTTCATCTTGCCTCGTTAGATTCGGTCGTGATAGGGAATATCTCATTGATTTGATTGGGAAGCCAGGTTGCTTATGCAAACCTGATTCATTGCTCAATGGTCCATCATCCATCTCAATTTCTTCACCATTGCGATTTCCAAGAGTACAACCTATTGAATCTACCATTGATTTCAGGTCACTGGCCAACCAGTATTTCTTGGATAGTCAATCACTTAATAGTGTATTTGATGAAGCTTCTTCAGGGAATGTTGTGTCTGGGAAGGATGTCGAATCCTCTGCCTATCAAAGACCATTCATTAGGAATGATGTACATGGTAAAAACACAGTGCTTACTGGTGACGGTGATAGAAGTTCTCAGTTATTGAATCCAAAAGTCTCTAAACTAAGTGCTCAAGATGGAAAGTCTGAGCAATTTAGATTATGTGATACTTCTCAATATACTGTACCATCTGCGCCTCTTGTAGAACATGTAGCCCCCTTAAACCAGATTGCAATGATTGGTTCCAAAGATTCTGAGCCTCTCTTAGCATTGTCTCATTTAAGGATGGATCCTGCTAGCAATTTATCATTCATTGAGGGGAGCCAACCAGTTAAAAACCCAAGTGAACTTTCCCTTGGCTTAGAAGATTTGGTTATTCCTTGGAAAGATCTTGTTTTGAGGGAGAAAATCGGCTCAGGTTCTTTTGGGACTGTATACCATGCTGATTGGCACGGATCTGATGTTGCGGTGAAGATTTTAATGGAACAAGACCTACATGTTGAGCGTTTTGAAGAATTTCTTAGGGAGGTTGCCATAATGAAATCTTTACGTCATCCGCACATTGTTCTCTTTATGGGTGCAGTCACTGAGCCTCCTAACTTGTCCATTGTCACGGAATACTTATCGAGAGGTAGCATGAACAATCTTTTGCATAGACATGGAGCAAGAGAAGTATTAGATGAGAGACGTCGGTTAAACATGGCATATGATGTTGCAAAGGGAATGAATTATCTTCACAAACGTAACCCACCAATTGTTCATCGTGATTTGAAATCTCCAAATCTTTTGGTTGATAAGAAGTACACAGTTAAGGTTTGCGATTTTGGGCTCTCACGCTTGAAGGCACACACATATCTTTCTTCAAAATCAGCTGCTGGGACTCCTGAATGGATGGCACCAGAAGTTCTCCGCGATGAGCCATCAAATGAGAAATCAGATGTTTATAGCTTTGGTGTGATACTGTGGGAACTTGCTACGTTGCAGCAGCCATGGGGCAACTTGAACGCAGCGCAGGTTGTGGCAGCCGTTGGCTTTAAAGGCAAAAGGCTTGAGATCCCATGCGATTTAAACCCTCGAGTTGCTACTATTATAGAGGCTTGCTTTGCCAGTGAGCCCTGGAAGCGTCCATCCTTTTATGAAATAATGGGATCTTTGAAGCCATTGATCAAACCTTCTACGCCTCATCATATTCGCTCAAACGCATCATTAGTTGCTCGATGA | 2439 | 43.71 | MEMPGRRSDYTLLSQTPDEESLPADGIDNKGMNTQANRIGNVYPWIGLQRHSSGSSYDDSSLSSDCYAPTLSNPPPNEIDVFGSGGWSAKSWAQQTEESYQLQLALILRLSSDASCADDLNFVDPMPDERVRRSFSSSAEAVSHRFWVNGCMSYFEKVPDGFYLIHGMDPYVWSLCSNLQEDGRIPSFESLKTVDSSIGSSIEVVLIDQRSDASLKELLNRVHNISLSCITPKEVADHLAKLVCNHMGGSVSEGEDDLISSWRECSDDLKECLGSIVIPLCSLSAGLCRHRALLFKVLADSIDLPCRIAKGCKYCTRDDASSCLVRFGRDREYLIDLIGKPGCLCKPDSLLNGPSSISISSPLRFPRVQPIESTIDFRSLANQYFLDSQSLNSVFDEASSGNVVSGKDVESSAYQRPFIRNDVHGKNTVLTGDGDRSSQLLNPKVSKLSAQDGKSEQFRLCDTSQYTVPSAPLVEHVAPLNQIAMIGSKDSEPLLALSHLRMDPASNLSFIEGSQPVKNPSELSLGLEDLVIPWKDLVLREKIGSGSFGTVYHADWHGSDVAVKILMEQDLHVERFEEFLREVAIMKSLRHPHIVLFMGAVTEPPNLSIVTEYLSRGSMNNLLHRHGAREVLDERRRLNMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAHTYLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNAAQVVAAVGFKGKRLEIPCDLNPRVATIIEACFASEPWKRPSFYEIMGSLKPLIKPSTPHHIRSNASLVAR | 812 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3397525 | 3405887 | - | Sed0017165.2 | Sed14g0331 | 736049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0331 | 812 | PRINTS | Tyrosine kinase catalytic domain signature | 762 | 784 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | PRINTS | Tyrosine kinase catalytic domain signature | 699 | 709 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | PRINTS | Tyrosine kinase catalytic domain signature | 718 | 740 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | PRINTS | Tyrosine kinase catalytic domain signature | 652 | 670 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | PRINTS | Tyrosine kinase catalytic domain signature | 611 | 624 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | FunFam | Serine/threonine-protein kinase CTR1 | 616 | 801 | - | - | |
Sed14g0331 | 812 | Pfam | Protein tyrosine and serine/threonine kinase | 538 | 790 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Sed14g0331 | 812 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 658 | 670 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | ProSitePatterns | Protein kinases ATP-binding region signature. | 543 | 564 | IPR017441 | GO:0005524(InterPro) | |
Sed14g0331 | 812 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 789 | IPR011009 | - | |
Sed14g0331 | 812 | Gene3D | Transferase(Phosphotransferase) domain 1 | 616 | 804 | - | - | |
Sed14g0331 | 812 | SMART | serkin_6 | 537 | 795 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | Gene3D | Phosphorylase Kinase; domain 1 | 530 | 615 | - | - | |
Sed14g0331 | 812 | CDD | STKc_MAP3K-like | 543 | 791 | - | - | |
Sed14g0331 | 812 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 124 | 792 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Sed14g0331 | 812 | ProSiteProfiles | Protein kinase domain profile. | 537 | 795 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Sed14g0331 | 812 | FunFam | Serine/threonine-protein kinase isoform 1 | 528 | 615 | - | - | |
Sed14g0331 | 812 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 139 | 345 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0567 | Sed-Chr2:43317856 | Sed14g0331 | Sed-Chr14:3397525 | 2.50E-282 | dispersed | |
Sed04g1447 | Sed-Chr4:29042025 | Sed14g0331 | Sed-Chr14:3397525 | 9.80E-287 | dispersed | |
Sed14g0331 | Sed-Chr14:3397525 | Sed07g1367 | Sed-Chr7:10390163 | 1.90E-29 | dispersed | |
Sed14g0330 | Sed-Chr14:3397525 | Sed14g0331 | Sed-Chr14:3397525 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80140 | PF07714 | PK_Tyr_Ser-Thr | 5.30E-70 | CL0016 | Sed | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0331 | K14510 | - | csv:101208800 | 1350.11 |