Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0345 ATGGTGTTGAAGACTGAGCTCTGTCGATTCAGTGGTGCAAAGATATATCCCGGTAGGGGGATCAGATTTGTCCGTGGAGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGGCTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGCGACGTGCCACCAAGAAACCATACTCAAGGTCCATAGTGGGTGCTACATTGGAGGTAATCCAAAAGAAGAGAGCTGAGAAACCCGAGGTTCGTGATGCTGCCAGAGAAGCAGCCCTTCGGGAAATTAAGGAGAGAATTAAGAAAACGAAGGATGAAAAGAAGGCAAAGAAGGCAGAAGTGGCATCCAAAACACAGAAGACACAGAGCAAGGCAAACGTATCACGGGGAGCTGCACCTAAAGGACCGAAGCTTGGTGGCGGTGGCGGCAAACGTTGA 495 48.28 MVLKTELCRFSGAKIYPGRGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKTQKTQSKANVSRGAAPKGPKLGGGGGKR 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3576636 3579169 - Sed0017178.1 Sed14g0345 736063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0345 164 PANTHER 60S RIBOSOMAL PROTEIN L24 4 158 IPR000988 GO:0002181(PANTHER)|GO:0003729(PANTHER)|GO:0003735(PANTHER)|GO:0022625(PANTHER)
Sed14g0345 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Sed14g0345 164 MobiDBLite consensus disorder prediction 118 164 - -
Sed14g0345 164 Coils Coil 112 139 - -
Sed14g0345 164 SMART 4TRASH 8 46 IPR011017 -
Sed14g0345 164 Gene3D - 69 151 - -
Sed14g0345 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Sed14g0345 164 FunFam 60S ribosomal protein L24 3 64 - -
Sed14g0345 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Sed14g0345 164 MobiDBLite consensus disorder prediction 118 136 - -
Sed14g0345 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Sed14g0345 164 Pfam Ribosomal protein L24e 3 67 IPR000988 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed10g1100 Sed-Chr10:11436311 Sed14g0345 Sed-Chr14:3576636 6.60E-70 wgd
Sed14g0345 Sed-Chr14:3576636 Sed02g0583 Sed-Chr2:43487099 7.30E-69 wgd
Sed14g0345 Sed-Chr14:3576636 Sed04g1430 Sed-Chr4:28860908 2.30E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0345 K02896 - csv:101206866 248.825