Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed14g0358 | ATGTCTTTCACTCTCTGTTATCCCTCCATCACTTTCCCCTCTTTTCATCTCCACAAACAAATCCCTCGCCGGCGAAAAACCCTAATTCCAAATCTCTCCGTCAAATCCTCCATTGACGAAGCCGATTCCACACGGCCGACGAAGCTCAGCCCTGCGAAATCCGGATCCTGGGTCAGCCCGGACTGGCTCACTTCCCTGACCCGCGCCCTAACCCTAGGCCGGGGCGACGACTCCGGCATTCCCATTGCCAGTGCCAAGCTCGATGACGTCTCCGATCTCCTCGGCGGCGCCCTTTTTCTGCCGCTGTTCAAGTGGATGAACGACTACGGACCCATCTACCGCCTCGCCGCTGGCCCGAGGAACTTCGTTGTGGTTAGCGATCCCGCCATTGCCAAGCATGTGCTGAGGAATTATGGGAGTTATTCTAAAGGCCTTGTTTCTGAGGTCTCCGAGTTCTTGTTTGGGTCTGGTTTTGCTATTGCTGAAGGCCCGCTTTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCTCTTCACAAGAAGTACTTGTCGGTTATTGTTGATCGAGTATTCTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGCAAAAGGATGCATTAAATAATAATTCAGTTAACATGGAGGAAAATTTTTCCCAACTAACTCTCGATGTTATTGGTCTATCTGTATTCAACTACAATTTTGATTCTCTTTCTACTGACAGCCCTGTGATTGATGCAGTTTACACTGCTTTGAAAGAGGCTGAGGCTCGTTCTACTGATCTATTACCATATTGGAAGATTAATGCTCTGTGTAAGATAATTCCAAGACAGATAAAAGCTGAAGAAGCGGTTACGGTGATAAGAAGAACTGTTGAAGAGCTGATTGCCAAGTGCAAAGAAATTGTGGAAACTGAGGGTGAGCGAATGGATGAAGAGGAATATGTGAATGATGCTGATCCAAGTATCCTTCGTTTCTTGCTGGCTAGTAGACAAGAGGTCTCAAGTGTACAATTACGAGATGATCTATTGTCAATGTTGGTTGCTGGACATGAAACTACCGGTTCTGTTTTGACTTGGACACTGTATCTTTTAAGTAAGGATTCGTCATCATTGATCAAGGCACAAAATGAAGTTGATAGAGTCTTGCAAGGAAGGCCTCCTTCCTATGAAGATACGAAAGAACTTAAATTCTTGACACGTTGTATCCTTGAGTCGATGCGCCTTTACCCACACCCACCTGTTCTGATAAGAAGAGCTCAAGTTGCTGACGTACTTCCTGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTGTATAACATCCATCGATCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTTATACCGGAAAGATTTGACTTGGAAGGTCCTGTGCCTAATGAAACCAATACAGATTTCAGATTTATTCCGTTCAGCGGAGGTCCCCGAAAGTGTGTAGGTGATCAATTTGCTCTACTTGAAGCGATCGTTGCACTTGCCATATTTCTGCAGCATATGAACTTCGAGTTGGTTCCAGATCAAACCATTGGAATGACTACTGGAGCAACTATACATACAACAGATGGTTTGTACATGAAACTCAGCCAAAGGCAGCTGACCCCAGAATTAATTTCCCTTGCTTCTTCAAGGTAA | 1662 | 45.43 | MSFTLCYPSITFPSFHLHKQIPRRRKTLIPNLSVKSSIDEADSTRPTKLSPAKSGSWVSPDWLTSLTRALTLGRGDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGSYSKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLQKDALNNNSVNMEENFSQLTLDVIGLSVFNYNFDSLSTDSPVIDAVYTALKEAEARSTDLLPYWKINALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVETEGERMDEEEYVNDADPSILRFLLASRQEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLIKAQNEVDRVLQGRPPSYEDTKELKFLTRCILESMRLYPHPPVLIRRAQVADVLPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQTIGMTTGATIHTTDGLYMKLSQRQLTPELISLASSR | 553 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 3687746 | 3696095 | + | Sed0014925.1 | Sed14g0358 | 736076 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed14g0358 | 553 | PRINTS | P450 superfamily signature | 488 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | P450 superfamily signature | 348 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | P450 superfamily signature | 400 | 411 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | P450 superfamily signature | 479 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 488 | 511 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 440 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 357 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 220 | 238 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 337 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 478 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PRINTS | E-class P450 group I signature | 106 | 125 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | Gene3D | Cytochrome P450 | 81 | 550 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | CDD | CYP97 | 100 | 534 | - | - | |
| Sed14g0358 | 553 | SUPERFAMILY | Cytochrome P450 | 94 | 540 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed14g0358 | 553 | PANTHER | CYTOCHROME P450 FAMILY 4 | 97 | 537 | IPR050196 | GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER) | |
| Sed14g0358 | 553 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 481 | 490 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed14g0358 | 553 | Pfam | Cytochrome P450 | 102 | 522 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed13g1059 | Sed-Chr13:9119606 | Sed14g0358 | Sed-Chr14:3687746 | 7.30E-130 | dispersed | |
| Sed13g1060 | Sed-Chr13:9119606 | Sed14g0358 | Sed-Chr14:3687746 | 8.50E-130 | dispersed | |
| Sed14g0358 | Sed-Chr14:3687746 | Sed08g2479 | Sed-Chr8:37711974 | 2.80E-24 | dispersed | |
| Sed14g0358 | Sed-Chr14:3687746 | Sed14g0359 | Sed-Chr14:3687746 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed14g0358 | K09837 | - | csv:101204961 | 984.556 |