Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0398 ATGGCACCCACAGCTCTTTTCGAACAACTCGCAAGCCAGAACGCTTCTAGGAAGAGCTTGTGTATAGATCGTAACGATCCACTAAATTGGGGTGCGACTGCTGAGTCTCTAAAGGGAAGCCATCTCGATGAGGTCAAGCGCATGATCGAGGAGTATCGGAGGCCGCTTGTCAAGCTTGGTGGTGAGACGCTCACCATTTCCCAAGTTGCTGCTATTGCCACTCGTGATAACTATGTGATTGTGGAATTAGCTGAGTCTGCTCGAGCTGGTGTTAAAGCGAGTAGTGATTGGGTTATGGATAGCATGAGTAAAGGTACTGATAGTTATGGTGTTACTACTGGCTTTGGTGCTACCTCCCATCGAAGGACGAAACAAGGTGGTGCTCTTCAAAAGGAGTTGATTCGATTCTTGAATGCGGGGATATTTGGGGTTGGGGCTGAGTCAAGTCATACTTTGCCCCACTCAGCTACTAGGGCAGCTATGTTGGTGAGAATCAACACTCTTCTTCAAGGCTACTCTGGTATTAGATTTGAGATTTTGGAAGCTATAACCAAACTCTTGAACAACAACATCACTCCATGCTTGCCTCTTCGTGGAACTATTACGGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTACTTACTGGTCGACCAAACTCTAAAGCCATTGGTCCAAATGGGGAGAGTCTTAAAGCAACAGAGGCTTTCCAACAAGCAGGTATTCCTTCTGGGTTTTTTGAGTTGCAGCCAAAGGAAGGTCTTGCTCTCGTTAATGGTACCGCTGTTGGTTCTGGGTTGGCTTCTATTGTTCTCTTTGAGGCAAATATTTTGGCTGTTTTTTCCGAGTTATTGTCAGCAATTTTCGCTGAGGTCATGCAAGGAAAACCTGAATTTACAGATTATTTGACCCATAAATTAAAGCACCATCCTGGTCAAATTGAGGCAGCTGCAATTATGGAGCACATTTTAGATGGAAGTTCTTACATGAAAGCTGCTAAGAAGTTGCACGAAATTGATCCCCTCCAAAAGCCCAAACAAGATCGTTACGCCCTTAGAACTTCACCCCAATGGTTGGGTCCTTTGATTGAAGTAATTCGATTCTCCACAAAGTCAATTGAGCGAGAGATTAATTCAGTTAACGACAACCCATTGATTGATGTTTCAAGGAATAAGGCTTTGCATGGAGGTAACTTCCAAGGAACTCCTATTGGGGTCTCCATGGATAACACTCGTTTGGCCATTGCTTCAATTGGAAAGCTCATGTTTGCTCAATTCTCAGAACTTGTCAATGATTTTTATAACAACGGTTTGCCTTCTAATCTTTCTGCAAGTAGAAACCCAAGCCTGGATTATGGATTCAAAGGTGCTGAAATTGCCATGGCTTCATACTGCTCTGAACTTCAATATCTTGCGAATCCAGTGACTAGTCATGTTCAGAGTGCCGAGCAACACAACCAAGATGTGAACTCTCTTGGTTTAATTTCTTCAAGGAAAACAGCTGAAGCAATTGATATTCTGAAACTCATGTCATCGACATTTTTGCTTGCTCTGTGTCAAGCAATCGACTTGAGGCATTTGGAAGAAAACTTGAAGAGCACTGTGAAAAGCACAGTTAGTCAAATAGCCAAGAAAGTGTTGACCACATCATCTAATGGTGCACTTCACCCATCAAGATTTTGTGAGAAAGATCTGCTTAAAGTTGTTGACCGAGAGTATATATTTACTTATATCGATGATCCATGCAGTGGTACTTACCCATTGAGTCAAAAGTTGAGGCAAGTTCTCGTCGAGCATGCACTTGCCAATGGTGATGGTGAAAAGAGCCAAGACTCTTCGATCTTTCAAAAGATTGTTGCTTTTGAGGAAGAACTAAAGGCAGTGTTACCAAAAGAAGTTGAAAATGCAAGGTTGTCATATGAGAGTGGAAATTCTAAGATTGAAAATCAAATTAAGGAGTGTAGATCTTATCCATTGTATAGGTTTGTGAGAGAAGAGTTGAGAACCAAATTGCTTACAGGAGAAAATGTAATATCTCCGGGAGAAGAGTGTGAAAAGGTATTTACAGCTTTGTGTCAAGGTAAGATGATTGACTCGATTTTGGAGTGCTTGAAGGAGTGGAATGGTGCCCCCCTTCCTATTTGCTAA 2154 42.29 MAPTALFEQLASQNASRKSLCIDRNDPLNWGATAESLKGSHLDEVKRMIEEYRRPLVKLGGETLTISQVAAIATRDNYVIVELAESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGVGAESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGESLKATEAFQQAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVFSELLSAIFAEVMQGKPEFTDYLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLLALCQAIDLRHLEENLKSTVKSTVSQIAKKVLTTSSNGALHPSRFCEKDLLKVVDREYIFTYIDDPCSGTYPLSQKLRQVLVEHALANGDGEKSQDSSIFQKIVAFEEELKAVLPKEVENARLSYESGNSKIENQIKECRSYPLYRFVREELRTKLLTGENVISPGEECEKVFTALCQGKMIDSILECLKEWNGAPLPIC 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4112124 4114498 + Sed0026131.1 Sed14g0398 736116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0398 717 CDD PAL-HAL 62 527 IPR001106 -
Sed14g0398 717 SUPERFAMILY L-aspartase-like 26 717 IPR008948 GO:0003824(InterPro)
Sed14g0398 717 NCBIfam phenylalanine ammonia-lyase 26 707 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Sed14g0398 717 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 199 215 IPR022313 GO:0016841(InterPro)
Sed14g0398 717 Gene3D - 530 651 IPR023144 -
Sed14g0398 717 Pfam Aromatic amino acid lyase 64 540 IPR001106 -
Sed14g0398 717 Gene3D Fumarase/aspartase (Central domain) 264 712 - -
Sed14g0398 717 FunFam Phenylalanine ammonia-lyase 530 651 - -
Sed14g0398 717 Gene3D - 18 263 IPR024083 -
Sed14g0398 717 FunFam Phenylalanine ammonia-lyase 17 263 - -
Sed14g0398 717 PANTHER HISTIDINE AMMONIA-LYASE 23 717 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Sed14g0398 717 FunFam Phenylalanine ammonia-lyase 264 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0397 Sed-Chr14:4102041 Sed14g0398 Sed-Chr14:4112124 0.00E+00 tandem
Sed14g0398 Sed-Chr14:4112124 Sed14g0399 Sed-Chr14:4116312 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0398 K10775 - csv:101218617 1305.04