Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0415 ATGGCCAAACACTCCGACGCCGGAGCCTTCGCCGGAAAAGACTACCACGACCCACCTCCGGCCCCACTCATCGACCCCAACGAGCTCACCCAGTGGTCCTTCTACAGAGCCATCATCGCCGAGTTCATCGCCACGCTTCTCTTCCTCTACGTCACCGTCCTCACCGTCATCGGCTACAAAAGCCAGTCTGACCCGAAAAGCGGCGGCGATATCTGCGGTGGCGTCGGCATTCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCGTCCTCGTCTACTGTACTGCTGGAATCTCCGGTGGGCATATAAATCCAGCGGTTACATTTGGGCTGCTATTGGCTCGGAAAGTTTCATTAGTTCGAGCCATTTTGTACATGGTGGCTCAATGTATTGGCGCAATTTGTGGATGCGCTTTGGTCAAATCCTTTCAAAAGGGTTTGTACCATCGCTACGGCGGCGGAGCTAATTCGCTCGAAGTCGGTTACAGCACCGGCACTGGCTTAGGTGCCGAAATCATCGGAACCTTTGTTCTTGTCTACACTGTGTTTTCTGCTACGGATCCTAAAAGAAATGCCCGAGATTCTCACGTTCCTGTTTTAGCCCCACTTCCGATTGGATTTGCTGTGTTTATGGTTCACCTTGCCACTATCCCGATCACCGGCACCGGCATTAACCCCGCTCGAAGCTTTGGTGCTGCTGTGGTGTTTAACCAGAGCAAGCCCTGGGATGACCAGTGGATTTTCTGGGTTGGACCATTCTTTGGAGCTGCCATTGCTGCATTTTATTACCAGTTCATTTTAAGAGCTGGAGCTGTTAAAGCTCTTGGATCGTTTAGGAGTACCCAAAGTGTTTAA 855 52.28 MAKHSDAGAFAGKDYHDPPPAPLIDPNELTQWSFYRAIIAEFIATLLFLYVTVLTVIGYKSQSDPKSGGDICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAILYMVAQCIGAICGCALVKSFQKGLYHRYGGGANSLEVGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVVFNQSKPWDDQWIFWVGPFFGAAIAAFYYQFILRAGAVKALGSFRSTQSV 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4313852 4316751 + Sed0019391.1 Sed14g0415 736133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0415 284 MobiDBLite consensus disorder prediction 1 21 - -
Sed14g0415 284 CDD MIP 36 266 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 Gene3D Glycerol uptake facilitator protein. 21 284 IPR023271 -
Sed14g0415 284 SUPERFAMILY Aquaporin-like 27 268 IPR023271 -
Sed14g0415 284 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Sed14g0415 284 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PRINTS Major intrinsic protein family signature 206 228 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PRINTS Major intrinsic protein family signature 246 266 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PRINTS Major intrinsic protein family signature 170 188 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 9 280 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Sed14g0415 284 Pfam Major intrinsic protein 28 263 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 NCBIfam MIP family channel protein 40 263 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Sed14g0415 284 FunFam Probable aquaporin PIP1-2 21 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1247 Sed-Chr1:9290870 Sed14g0415 Sed-Chr14:4313852 1.30E-29 dispersed
Sed02g0654 Sed-Chr2:44341508 Sed14g0415 Sed-Chr14:4313852 1.00E-118 dispersed
Sed03g2005 Sed-Chr3:13940345 Sed14g0415 Sed-Chr14:4313852 1.20E-143 dispersed
Sed05g2850 Sed-Chr5:39649883 Sed14g0415 Sed-Chr14:4313852 1.80E-128 dispersed
Sed06g2041 Sed-Chr6:44490237 Sed14g0415 Sed-Chr14:4313852 5.10E-134 dispersed
Sed07g2268 Sed-Chr7:38529118 Sed14g0415 Sed-Chr14:4313852 3.60E-124 dispersed
Sed07g2554 Sed-Chr7:41078724 Sed14g0415 Sed-Chr14:4313852 7.00E-107 dispersed
Sed07g2555 Sed-Chr7:41089377 Sed14g0415 Sed-Chr14:4313852 6.30E-108 dispersed
Sed14g0413 Sed-Chr14:4282412 Sed14g0415 Sed-Chr14:4313852 2.80E-121 dispersed
Sed14g0415 Sed-Chr14:4313852 Sed14g0418 Sed-Chr14:4333918 4.40E-106 proximal
Sed14g0414 Sed-Chr14:4291788 Sed14g0415 Sed-Chr14:4313852 3.10E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0415 K09872 - csv:101214884 521.931