Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0437 ATGAGGGCTCATGCCGAGAGGTTCAACGGGAATGGAAGCCTGAACGACGGTTTACCTGGAAGGGAGCAGAGCCTGATTGAGGTAAATGAGATGAAGGTCAATGGATTATCTCGAAATGCAGAAGATGGACTAAAACGTACCGTTCAAGCTCAGGACATTCGACAAATACAACAGCAACAACAGCCTCATGGATCTATGGTCTGTTGGGAGAGATTTCTACATCTTCGGTCCCTCAGGGTTTTGCTTGTAGAAAATGATGACTCCACTCGGCATATAGTCACTTCACTGCTTCGCAATTGCAGTTATGAAGTTATTGCGGCTGCAAATGGACTACATGCGTGGAAAATGCTAGAAGATTTGACAAATCACATAGATCTTGTCTTAACAGAGGTGGTCATGCCTTGTTTATCTGGCGTTGGTCTTTTAAGCAAGATTATGAGCCATACAACAAGGAAAAATATACCTGTAATCATGATGTCTTCTCATGACTCAATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTCGATTTTTTAGTGAAGCCCATCCGAAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGCGGTAGTGGAAGTGAGAGTGGCACACAGACGCAAAAATCTGTGAAGTCAAAAAATGTTGAAAAAACAGACAACACCGGGAGCAATGATGAAGAAGACAACGAGAGTATGGGTTTCAATATTGGAGATGGAAGCGACGATGGTAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAGGTTGAAAGCTCTCAACCAATATCTGCATCAGCCTGGGATAAAAAACGTGAACGTCCTGATAGTACTTGTGCTCAAGTTGTCCACTCTAATGCTGATGCATTTGCTGACAATGTGCCACCTGTTTTGACAGCTGAGTGCCGAGTGCTTAAAAAGCAACTTGAAACTGATACCATAGGTAAATTTGAATCGGGAGCGCACAGAAATCTAGATTTACAACTTGAACTGACTACGGAACATCCAACCAAACTAGTTAACAGAAAAAAGAATAATTTGCTTGAGATAGGAAATGGATCTTGTGGATTCAATGAACAGTTCAACAAAGGACATCTTGACCTCAACTGTGAGAGCCCATCCAGAAATCTTATGTACAAACAAACATCTGTTACTGGTTTTGCTACCAATCTTACTAATTCTAAGATGGATGTATCTGTCTTTGAGGCCCCGAGAAACCATCCCAAAATCACAGACATTAAGAATAATGATGTTACAGATTCAGAAGCATTTCCATCCCTCAAGCTTGGATTAAAAAGGCCTAGAGGAGTTCAAACGACAGGGAAAGTGGTCCAAGATGAGCGGAATGTTTGGAGATGCTCAGATTCTTCAGCCTTTTCTAGGTACAATGCTGGCTCAAATTCTAAGAAGATTCCAACCTCGAATGCTGGAAGTATTTCTCCGCCTGTTAATGGCTTAGAAGTTGCAAACCAAGAGAACATGCGAGATGTTCGATCTCATTCAAGTAGTAATCCTCCCAATCAATGCTCAAATGGAGATAGCAATAATAATGACATGGGGTCCACTACGAATAATGCATTTTCCAAGTCCTTAGTTACTAATAACAAGCCAGCAATGGCATCAACAGTCAACTGTTTGCACCCATCTGCAGCTTTCCAGCTTATTAAGAATGGCAGTCTATCCGTTCCTCAGCAAGCTGATGATGTCAATAATGGTACAACTACAACAATGCAGACTCAGTCTAATTGTGGGCACATGGAATCTCAAATTCAGCAACTATGTCACCCGTATGATCACGCTCATCAGCAGCATGCTCACAATATTCAACAAGTGCCATATGAGCACAATGATTTTTCATTGAAGAAAATATCAGCTGCCTTGCATTGTGGTTCAACCAATGTGTTAAATGGCCCTGTAGAAGGTAATGCAGCAAATTATAGTGTCAATGGCAGCGCCTCAGGCAGTAACCATGGAAGTAATGGGCAAAATGGAAGTAGCACTGCAGTAAATGTTGGAGGGCTGAATATGGAAAGTGATAATGGAATAGGTAGGAAAAGCCGAAGTGGGGATGCCAGTGGAAGTGGAAGTGGAAGCGGAAGTGGATACAAAGTGGACCAAGACAAAGTTTCACTAAGGGAAGCAGCCTTGACAAAGTTTCGCCAGAAAAGGAAAGAAAGATGCTTCCGGAAAAAGGTTCGATACCAGAGTAGAAAGAAATTAGCAGAACAGAGACCCCGTGTTAGGGGACAGTTTGTTAGACAAAACACAAGCGAAAACAGAAGCAATGGGGGAGGAGATTGCTAA 2328 42.18 MRAHAERFNGNGSLNDGLPGREQSLIEVNEMKVNGLSRNAEDGLKRTVQAQDIRQIQQQQQPHGSMVCWERFLHLRSLRVLLVENDDSTRHIVTSLLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLSGVGLLSKIMSHTTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKNVEKTDNTGSNDEEDNESMGFNIGDGSDDGSGTQSSWTKQAIEVESSQPISASAWDKKRERPDSTCAQVVHSNADAFADNVPPVLTAECRVLKKQLETDTIGKFESGAHRNLDLQLELTTEHPTKLVNRKKNNLLEIGNGSCGFNEQFNKGHLDLNCESPSRNLMYKQTSVTGFATNLTNSKMDVSVFEAPRNHPKITDIKNNDVTDSEAFPSLKLGLKRPRGVQTTGKVVQDERNVWRCSDSSAFSRYNAGSNSKKIPTSNAGSISPPVNGLEVANQENMRDVRSHSSSNPPNQCSNGDSNNNDMGSTTNNAFSKSLVTNNKPAMASTVNCLHPSAAFQLIKNGSLSVPQQADDVNNGTTTTMQTQSNCGHMESQIQQLCHPYDHAHQQHAHNIQQVPYEHNDFSLKKISAALHCGSTNVLNGPVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNVGGLNMESDNGIGRKSRSGDASGSGSGSGSGYKVDQDKVSLREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRQNTSENRSNGGGDC 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4453361 4468987 + Sed0014628.1 Sed14g0437 736155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0437 775 CDD psREC_PRR 80 183 - -
Sed14g0437 775 FunFam Two-component response regulator-like PRR37 78 236 - -
Sed14g0437 775 Pfam Response regulator receiver domain 80 191 IPR001789 GO:0000160(InterPro)
Sed14g0437 775 MobiDBLite consensus disorder prediction 757 775 - -
Sed14g0437 775 ProSiteProfiles CCT domain profile. 720 762 IPR010402 GO:0005515(InterPro)
Sed14g0437 775 MobiDBLite consensus disorder prediction 656 713 - -
Sed14g0437 775 ProSiteProfiles Response regulatory domain profile. 79 197 IPR001789 GO:0000160(InterPro)
Sed14g0437 775 MobiDBLite consensus disorder prediction 202 258 - -
Sed14g0437 775 Gene3D - 77 289 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 202 219 - -
Sed14g0437 775 Pfam CCT motif 720 762 IPR010402 GO:0005515(InterPro)
Sed14g0437 775 PANTHER TWO-COMPONENT RESPONSE REGULATOR 78 430 IPR045279 GO:0009736(InterPro)
Sed14g0437 775 MobiDBLite consensus disorder prediction 470 495 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 1 20 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 503 536 - -
Sed14g0437 775 SMART REC_2 78 193 IPR001789 GO:0000160(InterPro)
Sed14g0437 775 MobiDBLite consensus disorder prediction 689 711 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 744 775 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 470 536 - -
Sed14g0437 775 MobiDBLite consensus disorder prediction 656 682 - -
Sed14g0437 775 SUPERFAMILY CheY-like 76 202 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g1985 Sed-Chr3:13781527 Sed14g0437 Sed-Chr14:4453361 2.70E-307 dispersed
Sed03g1986 Sed-Chr3:13781527 Sed14g0437 Sed-Chr14:4453361 2.40E-267 dispersed
Sed05g0366 Sed-Chr5:2417260 Sed14g0437 Sed-Chr14:4453361 3.40E-56 dispersed
Sed08g2087 Sed-Chr8:35008628 Sed14g0437 Sed-Chr14:4453361 5.50E-12 dispersed
Sed12g1965 Sed-Chr12:30697397 Sed14g0437 Sed-Chr14:4453361 9.10E-12 dispersed
Sed14g0437 Sed-Chr14:4453361 Sed11g0169 Sed-Chr11:1498704 3.40E-07 dispersed
Sed14g0437 Sed-Chr14:4453361 Sed03g1983 Sed-Chr3:13781527 1.20E-307 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40546 PF00072 Response_reg 1.20E-20 CL0304 Sed TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0437 K12129 - csv:101210765 1146.72