Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0458 ATGAATATCCAAGCTAGCCAATGGTGTACCTCAGCCAAGCCTGTTCTTGCTGTTGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTCAATCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACCATTTTCATAGCTCCATTTGCACTGGTTTTTGACAAGAAAGTCAGACCAAAGATGACAATTCCAATCTTTGCCAAGTTAATGGTGCTCAGCTTGCTAGAGCCTGTGATTGATCAAAACTTATATTTCTTGGGAATGAAATACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATCCTCCCTGCTATAACCTTTGTAATGGCTTGGATCCTCAGGCTAGAGAAGGTTAAGATCAAAAGCATAAGAAGCCAAGCAAAGATAGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACACTAATCAAGGGTCCAATAGTGGAGCTATTTTGGGTGAAACAGAGAGCAAATCAACAACAACAACAACAGAGAAATGATATCAGCCTACAACACACAATCAAAGGCTCAATCATGATCACAATTGGGTGTTTCAGTTGGGCCGGCTTCATGATTCTTCAGGCAATTACATTGAAAGCTTACCCGGCTGAGCTTTCTCTTACGGCTTGGATTTGTCTGCTCGGCACTGCGGAAGGCACTGTGTTGGCTTTGGTTATGGAAAGAGGAAATGCCGCTGTTTGGTCCATTACTTGGGGAACCAAATTGCTCGCCGCTGTTTATAGTGGTATATTTTGTTCAGGACTTGCTTATTACATTCAAGGAATTGTAATGAAAGAAAAAGGACCTGTATATGTGACAGCATTTAGCCCATTGAGTATGATCATTGTAGCCATTATGAGTTCCTTCCTATTGGGCGAGCGCCTTTATTTCGGAAGGATACTTGGAGCTGCTGTGATAATTGTGGGGCTATACTTTGTTGTTTGGGGCAAAAGTAAAGATGAAAATTTCTCTAGTGAAGACCTAAAATTGCCCACCATACAAACAAAAGAAATAGAAGCCAATAATAAGGTGGAAAATTTAACAATAGAGGCCTCTAATTTAGCTGATCTAAGGAATGAGCAAAAACAATAA 1134 41.27 MNIQASQWCTSAKPVLAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIFIAPFALVFDKKVRPKMTIPIFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKIVGTIATVGGAMIMTLIKGPIVELFWVKQRANQQQQQQRNDISLQHTIKGSIMITIGCFSWAGFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGIVMKEKGPVYVTAFSPLSMIIVAIMSSFLLGERLYFGRILGAAVIIVGLYFVVWGKSKDENFSSEDLKLPTIQTKEIEANNKVENLTIEASNLADLRNEQKQ 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4628729 4634669 - Sed0020300.1 Sed14g0458 736176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0458 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 333 - -
Sed14g0458 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Sed14g0458 377 PANTHER WAT1-RELATED PROTEIN 16 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed14g0458 377 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020(InterPro)
Sed14g0458 377 Pfam EamA-like transporter family 15 135 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g2471 Sed-Chr7:40463867 Sed14g0458 Sed-Chr14:4628729 3.40E-98 dispersed
Sed07g2472 Sed-Chr7:40463867 Sed14g0458 Sed-Chr14:4628729 1.90E-69 dispersed
Sed13g0408 Sed-Chr13:2688284 Sed14g0458 Sed-Chr14:4628729 1.20E-50 dispersed
Sed14g0015 Sed-Chr14:192557 Sed14g0458 Sed-Chr14:4628729 1.10E-45 dispersed
Sed14g0046 Sed-Chr14:593769 Sed14g0458 Sed-Chr14:4628729 3.70E-88 dispersed
Sed14g0458 Sed-Chr14:4628729 Sed14g0459 Sed-Chr14:4628729 3.60E-164 tandem
Sed05g2352 Sed-Chr5:35994836 Sed14g0458 Sed-Chr14:4628729 1.30E-97 transposed
Sed01g2771 Sed-Chr1:22940492 Sed14g0458 Sed-Chr14:4628729 1.00E-94 wgd
Sed14g0458 Sed-Chr14:4628729 Sed03g2986 Sed-Chr3:46697725 1.30E-182 wgd
Sed14g0458 Sed-Chr14:4628729 Sed03g0062 Sed-Chr3:378573 2.60E-98 wgd
Sed14g0458 Sed-Chr14:4628729 Sed04g2820 Sed-Chr4:40128616 1.50E-106 wgd
Sed14g0458 Sed-Chr14:4628729 Sed07g2468 Sed-Chr7:40394864 2.60E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0458 - - - 0.0