Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0469 ATGAGCGTGAACATAACCTCCATTAAAGTGGCCTCTAATGGCGTCTGGCAAGGCGACAATCCTCTCCACTTCGCCTTCCCTCTCTTGATCCTTCAATCCGTCTTGATCCTCGCCCTCACCCGCTTCCTCTCCTTCGTCCTCAAGCCGCTCCGCCAGCCCAAAGTCATCGCCGAGATCGTCGGCGGGATTCTTCTGGGTCCATCGGCGTTTGGTCGGAACAAAGAATATCTCCATCGGATTTTCCCACAATGGAGCACACCAATTCTGGAATCAGTTGCAAGTATCGGTTTACTATTCTTTTTGTTCCTCGTCGGATTGGAACTAGATTTATCATCCATCCGTCGCAGCGGCCGCCGTGCATTCGGAATCGCCCTCGCCGGGATCTCCGTCCCCTTCATCTCAGGCATCGGCGTCGCCTTCATCCTCCGCAAAACAATCGACGGTGCCGACAAAGTCGGGATCGGCCAATTCATCGTCTTCATGGGTGTCGCTCTCTCCATCACCGCATTCCCCGTCTTGGCTCGAATTCTAGCTGAGCTAAAATTACTCACGACCCAAGTCGGCGAAACCGCCATGGCCGCGGCTGCATTCAACGACGTCGCGGCCTGGATCCTTCTAGCCCTCGCCGTTGCCCTAGCAGGCAACGGCGACGCTGGCACCCACAAGAGCCCATTAATTTCCATATGGGTCCTCCTCTCGGGTGCCGGGTTCGTCATTTTCATGATGACCGTAACCCGGCCTGCGATGAAGTGGGTAGCGGGTCGGTGCTCGTACGAGCACGACTCGGTGGACGAAGTGTACATTTGTTTGACATTGATTGGGGTGTTGGTGTCGGGTTTCGTGACGGATCTCATCGGGATCCATTCGATATTCGGCGGGTTTATATTCGGGTTAACGGTCCCGAAAGGGGGCCGGTTCGCGGAGCGATTGATCGAGAGGATTGAGGATTTCGTTTCGGGTTTGCTTCTTCCTTTGTATTTTGCTTCGAGCGGGTTGAAGACCGACGTGGCGAAGATTAGTGGCGGGAAAGCTTGGGGGCTGTTGGCGCTGGTGGTGGCGACGGCCTGCACCGGGAAGATTCTGGCGACGTTTGTGGCGGCGGTGGCGTTTATGATTCCGGCAAGGGAGGCACTGGCTTTGGGGGTTCTTATGAATACTAAAGGCTTGGTTGAACTCATTGTGCTCAATATTGGCAAAGAGAAAAAGGTTCTAAACGACGAAGTATTCGCCATATTAGTGCTAATGGCTCTATTCACAACATTCATCACCACCCCAACCGTGATGGCAGTATACAAGCCAGCCCGCGGCGGAGCCATCCGAACCCACCGCAAACTCCGCGACCACTCTGCCGCATCGGCCACTACGGACGACGAGCTCCGGATACTAGCCTGCCTCCACAGCTCGAGCAATGTACCTGGCCTAATCAGCTTGATCGAGTCAACTCGCAGCACAAAAAACTCATCCCTCAAACTCTTCGTAATGCACCTGGTCGAGCTAACCGAGCGGTCCTCCTCAATCATGATGGTCCAACGCGCCCACAAAAACGGGTTCCCATTCTTCGCCCGGTTCCGCAAGGGCGGGGAGTGGCACGACCAGATGTCGGCCGCCTTCCAGGCCTACACGCAGCTCAGCCGGGTCAAGATTCGGCCCACGACCGCGGTCTCCTCCCTGGCCACAATGCACGAGGACATCTGCAATGTGGCGGATGAGAAGAGGGTCACGATGGTAATTTTGCCGTTTCATCGGAATTGGAGAGCCGACGGCGGCGAGGAGGAGAATGTGGGCCATGGCTGGAGGGTTGTGAACCAGCGGGTGATTAAGACCGCACCTTGCTCTGTGGCGGTTCTTGTGGACCGGGGGTTTGGGCCGGTTGATGGTGTGGGGCAGATGATTTGTGTTGTGTTTTTTGGTGGGCCGGATGATAGGGAGGCCCTGGAGTTGGGCGGTCGGATGGCGGACCACCCGGCGGTTAAGGTCACAGTTGTCCGGTTTCGACCGGCTCCATCGGATTGGGTGGAGGGTAATAATGTCATTTTGCGATCTGTGCATTCTAAATCTAACGACAACCATTATAGCTGCTCCACAGCTCCTATCAACCCGGAAAAAGAAAAGGAGCTAGACGATGCAGCAATAACAGAATTCAGAAGCAAATGGGATGCAACAGTAGAATACACAGAGAAAGAGGCCAGCAACACGAACACGATAGTCGAAGGGGTCGTGGCGATCGGAAAGGAAGGGGGTTTCGACCTAATCGTGGTTGGGAAGGGTCGGGTTCCATCGAGCATGGTGGCGAAACTAGCGGACCGACCAGCGGAGCATGCTGAGCTCGGGCCGGTGGGCGATATATTGGCCAGCTCGGGCAAGGGAATAGTGTCTTCAATTTTAGTAATTCAACAACATGGAGCTCATACAGAAGAAACTTTGGTTTCAAATAAGCACCCAACTGACATTGAAGCTTCAAATGGTGTATAA 2472 54.69 MSVNITSIKVASNGVWQGDNPLHFAFPLLILQSVLILALTRFLSFVLKPLRQPKVIAEIVGGILLGPSAFGRNKEYLHRIFPQWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRRAFGIALAGISVPFISGIGVAFILRKTIDGADKVGIGQFIVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDVAAWILLALAVALAGNGDAGTHKSPLISIWVLLSGAGFVIFMMTVTRPAMKWVAGRCSYEHDSVDEVYICLTLIGVLVSGFVTDLIGIHSIFGGFIFGLTVPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKISGGKAWGLLALVVATACTGKILATFVAAVAFMIPAREALALGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARGGAIRTHRKLRDHSAASATTDDELRILACLHSSSNVPGLISLIESTRSTKNSSLKLFVMHLVELTERSSSIMMVQRAHKNGFPFFARFRKGGEWHDQMSAAFQAYTQLSRVKIRPTTAVSSLATMHEDICNVADEKRVTMVILPFHRNWRADGGEEENVGHGWRVVNQRVIKTAPCSVAVLVDRGFGPVDGVGQMICVVFFGGPDDREALELGGRMADHPAVKVTVVRFRPAPSDWVEGNNVILRSVHSKSNDNHYSCSTAPINPEKEKELDDAAITEFRSKWDATVEYTEKEASNTNTIVEGVVAIGKEGGFDLIVVGKGRVPSSMVAKLADRPAEHAELGPVGDILASSGKGIVSSILVIQQHGAHTEETLVSNKHPTDIEASNGV 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4690056 4697074 - Sed0008559.1 Sed14g0469 736187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0469 823 Gene3D - 453 778 - -
Sed14g0469 823 FunFam Cation/H(+) antiporter 15 28 437 - -
Sed14g0469 823 Gene3D - 28 435 IPR038770 -
Sed14g0469 823 PANTHER CATION/H + ANTIPORTER 9 807 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Sed14g0469 823 Pfam Sodium/hydrogen exchanger family 37 427 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed13g0817 Sed-Chr13:6036165 Sed14g0469 Sed-Chr14:4690056 5.40E-210 dispersed
Sed13g0818 Sed-Chr13:6036165 Sed14g0469 Sed-Chr14:4690056 5.40E-210 dispersed
Sed13g1508 Sed-Chr13:20276785 Sed14g0469 Sed-Chr14:4690056 1.20E-92 dispersed
Sed14g0064 Sed-Chr14:769376 Sed14g0469 Sed-Chr14:4690056 4.30E-136 dispersed
Sed14g0469 Sed-Chr14:4690056 Sed07g1579 Sed-Chr7:12630883 1.90E-213 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0469 K26731 - csv:101207589 1311.59