Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0474 | ATGGCCGGCAAAGGTGAAGGTCCGGCTATCGGAATCGATCTCGGAACCACCTACTCTTGCGTCGGTGTCTGGCAACATGATCGTGTTGAGATCATCGCCAATGATCAAGGAAACCGTACTACTCCGTCCTATGTTGGATTTACTGATACCGAGCGTTTGATTGGTGATGCTGCTAAGAATCAGGTCGCTATGAACCCGATCAACACTGTATTTGACGCAAAGAGGTTGATTGGTAGAAGATTCAGTGATGCTTCAGTCCAAAGCGACATGAAGTTGTGGCCATTCAAGATCATTCCTGGCCCTGGTGACAAACCCATGATTGTGGTTAACTATAAGGGCGAGGAGAAGCAGTTTGCCGCTGAGGAAATCTCTTCCATGGTTCTCATTAAGATGCGTGAGATTGCCGAGGCTTACCTTGGTTCCACTGTGAAGAATGCCGTCGTTACTGTTCCTGCTTACTTCAATGACTCTCAACGTCAGGCCACCAAGGATGCTGGTGTCATTGCTGGTCTCAATGTCATGAGAATCATCAATGAGCCCACTGCTGCAGCCATTGCCTACGGTCTAGACAAAAAGGCAACCAGTGTCGGCGAGAAGAATGTGTTGATTTTCGATCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTTACCATTGAGGAGGGTATCTTTGAGGTGAAGGCTACTGCTGGTGATACTCATCTTGGAGGTGAAGATTTTGACAACAGATTGGTCAACCACTTTGTTCAGGAGTTCAAGAGGAAGCACAAGAAGGATATCAGTGGCAACCCGAGAGCTCTTAGAAGATTGAGGACATCATGTGAGAGGGCTAAGAGAACCCTCTCATCCACTGCTCAGACCACCATTGAGATTGACTCATTGTACGAAGGAATTGATTTCTACACCACCATTACTCGTGCCAGATTTGAGGAATTGAACATGGATCTCTTCAGAAAGTGCATGGAGCCTGTGGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACTGTCCACGATGCTGTTCTTGTTGGTGGATCCACTAGGATTCCCAAGGTTCAACAGTTGTTGCAGGATTTCTTCAACGGCAAGGAGCTTTGCAAGAGCATCAACCCCGATGAAGCGGTTGCCTACGGTGCTGCCGTTCAAGCTGCCATCTTGAGTGGAGAGGGTAATGAGAAGGTGCAGGACCTTCTTCTCTTGGATGTCACCCCACTTTCGCTCGGTTTGGAAACTGCAGGTGGTGTTATGACTGTCTTGATCCCAAGAAACACCACCATTCCCACCAAGAAGGAACAGGTCTTCTCTACCTACTCCGACAACCAGCCTGGTGTGTTGATCCAAGTATACGAAGGCGAAAGAACAAGAACCCGCGACAACAACTTGCTCGGAAAATTTGAGCTCTCTGGCATCCCCCCAGCTCCCAGGGGCGTTCCTCAAATCACAGTGTGCTTTGACATCGATGCTAACGGTATCTTGAACGTTTCTGCTGAAGACAAGACCACCGGACAAAAGAACAAGATCACCATCACCAACGACAAGGGAAGACTCTCCAAGGATGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCAGAGGACGAGGAGCACAAGAAGAAGGTTGAATCAAAGAATGCATTGGAGAACTACGCTTATAATATGAGAAACACAATCAACGACGAGAAGATTGGTGCCAAGCTCTCCCCGGCTGACAAGAAGAAGATTGAGGATGCCATCGAGCAGGCCATCCAGTGGCTCGATGCCAACCAGTTGGCCGAGTCTGATGAGTTTGAAGACAAGATGAAGGAGCTTGAGAGCATCTGCAACCCGATCATTGCGAAGATGTACCAAGGTGCTGGAGCGGACATGGGTGGTGACGCCGATGATGGTGTCCCTCCTCCGAGTGGCAGCGGCGGTGCTGGTCCCAAGATCGAAGAAGTAGACTAA | 1950 | 48.82 | MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKIIPGPGDKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDAVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNTINDEKIGAKLSPADKKKIEDAIEQAIQWLDANQLAESDEFEDKMKELESICNPIIAKMYQGAGADMGGDADDGVPPPSGSGGAGPKIEEVD | 649 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4743015 | 4746190 | + | Sed0003490.1 | Sed14g0474 | 736192 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0474 | 649 | Gene3D | Actin; Chain A, domain 4 | 235 | 318 | - | - | |
Sed14g0474 | 649 | FunFam | Heat shock cognate 70 kDa protein 2 | 319 | 366 | - | - | |
Sed14g0474 | 649 | SUPERFAMILY | Actin-like ATPase domain | 198 | 388 | IPR043129 | - | |
Sed14g0474 | 649 | Coils | Coil | 521 | 541 | - | - | |
Sed14g0474 | 649 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 391 | 544 | IPR029047 | - | |
Sed14g0474 | 649 | MobiDBLite | consensus disorder prediction | 620 | 649 | - | - | |
Sed14g0474 | 649 | FunFam | Heat shock 70 kDa protein | 197 | 260 | - | - | |
Sed14g0474 | 649 | SUPERFAMILY | Actin-like ATPase domain | 8 | 191 | IPR043129 | - | |
Sed14g0474 | 649 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 9 | 583 | IPR013126 | GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro) | |
Sed14g0474 | 649 | FunFam | Heat shock protein 70 | 10 | 196 | - | - | |
Sed14g0474 | 649 | FunFam | Heat shock 70 kDa protein | 539 | 649 | - | - | |
Sed14g0474 | 649 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 392 | 549 | IPR029047 | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 36 | 48 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 396 | 415 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 477 | 493 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 146 | 166 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 209 | 219 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 337 | 353 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 369 | 389 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Sed14g0474 | 649 | PRINTS | 70kDa heat shock protein signature | 58 | 66 | - | - | |
Sed14g0474 | 649 | CDD | HSPA1-2_6-8-like_NBD | 9 | 387 | - | - | |
Sed14g0474 | 649 | FunFam | Heat shock 70 kDa protein | 71 | 126 | - | - | |
Sed14g0474 | 649 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 543 | 622 | IPR029048 | - | |
Sed14g0474 | 649 | FunFam | Heat shock 70 kDa | 235 | 318 | - | - | |
Sed14g0474 | 649 | FunFam | Heat shock 70 kDa | 391 | 545 | - | - | |
Sed14g0474 | 649 | Pfam | Hsp70 protein | 9 | 618 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Sed14g0474 | 649 | Gene3D | - | 71 | 126 | - | - | |
Sed14g0474 | 649 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Sed14g0474 | 649 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 203 | 216 | IPR018181 | - | |
Sed14g0474 | 649 | Gene3D | - | 545 | 619 | IPR029048 | - | |
Sed14g0474 | 649 | Gene3D | - | 192 | 366 | - | - | |
Sed14g0474 | 649 | Gene3D | - | 10 | 384 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0077 | Sed-Chr3:465813 | Sed14g0474 | Sed-Chr14:4743015 | 0.00E+00 | dispersed | |
Sed12g0915 | Sed-Chr12:5737452 | Sed14g0474 | Sed-Chr14:4743015 | 1.40E-71 | dispersed | |
Sed12g2279 | Sed-Chr12:33009967 | Sed14g0474 | Sed-Chr14:4743015 | 5.10E-307 | dispersed | |
Sed13g0392 | Sed-Chr13:2609474 | Sed14g0474 | Sed-Chr14:4743015 | 7.00E-150 | dispersed | |
Sed01g2763 | Sed-Chr1:22813534 | Sed14g0474 | Sed-Chr14:4743015 | 0.00E+00 | wgd | |
Sed14g0474 | Sed-Chr14:4743015 | Sed03g0075 | Sed-Chr3:458241 | 4.80E-265 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0474 | K03283 | - | csv:101215599 | 1202.96 |