Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0483 ATGAAAATTTTGACCGAGCGTGGTTATTCATTCACTACCTCAGCTGAGCGTGAAATTGTGAGAGATATGAAGGAAAAGTTGGCGTACATTGCCCTTGACTATGAACAAGAATTGGAAACCTCAAAGACCAGCTCTTCAGTTGAGAAGAGTTATGAGTTGCCTGATGGTCAGGTGATCACCATCGGCGCTGAGCGATTCCGATGCCCGAAAGTCCTTTTCCAACCATCCATGATCGGTATGGAAGCTGCTGGTATTCATGAGACGACATACAATTCCATCATGAAATGTGATGTTGACATCAGGAAAGATTTGTATGGAAACATTGGTGGTTCAACCATGTTCACTGGCATTGGTGATAGAATGAGCAAGGAGATCACGGCGTTGGCCCCGAGCAACATGAAGATTAAGGTCGTTGCGCCGCCTGAAAGGAAGTACAGTGTGTGGATTGGAGGTTCCATCTTGGCATCCTTGAGCACTTTCCAATGTGGATTGCCAAGGCTGAGTATGATGAGTCTGGCCCTTCAATTGTCCACAGGAAATGCTTCTGATCCTGCAAACACGGGTCGATTTCGAACGACCCTAGCTGTTTTCTCCAAAATGCTGGTGAATGCATTTGGGCTGCATAGAATAATTTTGACCTCAGTTTTGCTGCTCAAGGGGAAGAGTTCTTTTTAG 675 45.63 MKILTERGYSFTTSAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPKVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIGGSTMFTGIGDRMSKEITALAPSNMKIKVVAPPERKYSVWIGGSILASLSTFQCGLPRLSMMSLALQLSTGNASDPANTGRFRTTLAVFSKMLVNAFGLHRIILTSVLLLKGKSSF 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4811076 4812137 + Sed0026966.1 Sed14g0483 736201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0483 224 SMART actin_3 1 172 IPR004000 -
Sed14g0483 224 Gene3D - 83 146 - -
Sed14g0483 224 FunFam Actin, muscle 1 82 - -
Sed14g0483 224 Pfam Actin 6 161 IPR004000 -
Sed14g0483 224 SUPERFAMILY Actin-like ATPase domain 1 161 IPR043129 -
Sed14g0483 224 Gene3D - 147 161 - -
Sed14g0483 224 FunFam Major actin 69 146 - -
Sed14g0483 224 Gene3D Actin; Chain A, domain 4 1 82 - -
Sed14g0483 224 PANTHER ACTIN 1 160 IPR004000 GO:0005737(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed14g0483 Sed-Chr14:4811076 Sed12g1245 Sed-Chr12:8902651 1.90E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0483 K10355 - csv:101214247 305.064