Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed14g0488 | ATGGGAAATCGAATTGGGAAAATTGGCCGTTGTTTCGCCGGCGACGGCGAAATCTCCCGCCGGTATGATCCCGCCGACATTGCCGGCGACCCCCACGACGGCGGTTTCGGCCACTCTTTCTACTACCTCCCACCTGATCCAGTTGCTATCTCCGACGAGTTCATCACTCCGGTGGCAATTTTCAGGTCAATCTCCGGCGCCTCTGTTAGCGCCAACGTCTCAACGCCGCTCTCGACTTCCGTCGTTGATCTATATCCTTATAGCACGACGTTTGATCGCCCCGCCGCGTTCGATTGCTCGAATTCGTTCGCCTCCGTCCCGCTTCAGCCGGTGCCCCGACAGTCTGTGTCGGGGCATTCCGGTGGGTTCCCTTATTCGGGTCCGATTGAAAGAGGGTTCTTGTCCGGACCTTTGGCGAGCCGGAATGAATCGGGTCCGATCGACCGCGGGGTTCATTCCGGACCGATTGAAAAGAGCGGCGGAGGCGGCGGCGATAGGAAACAGAAATCTAAAAGAAAAAATCTAATTGGGATTGTGAAGAGAGCCATATCAAGAACAATTTCTTCTTACAAACAGAGTGAAAATGGTGGAGCTACTCAGAATCAAAGCAGCGTCCATTTGAGCTCGATGGCGGAAGACGATGGCGATGGCGATTACTTTCTCTCCGGCGAGAGCGTACAGTGGGCACAGGGGAAAGCCGGCGAGGACAGAGTACATGTGGTGATATCCGAGGATAACGGTTGGGTTTTCGTCGGGATTTACGACGGATTCAACGGTCCCGATGCTCCGGATTACTTACTCGCCAATCTCTACGCCGCGGTTCGTAAAGAACTCAAGGGCTTGATTTGGAATGAGAAGTTTGATTCAACTGCAACTTCATCTTCCATGAATTCATCAAACTCTGCTTCAACAGAGGAAGAAGATAGAACAACAACCCACATGAAAAATCATCAACAATCTACAGAGAAAACAGAGAGAGTTTACAATACAAATTACAGGACAAGTCAATTGATGAAGAAAGCTGATCAGAATCCCAAGAACTGGAAATGTGAATGGGAAAGGGAAAGATTAGATAGACAATTTGATCATCAACATCACCAAATATGGAATGAATCAACAGCAATCAATCATTCTGAAGTGTTGAATGTTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTACAAAATGCAGACAAGATGGTGACAAGAAATCCTGAGCTGGCTCTAATGGGTTCTTGTGTTATGGTTATGATGATGAGAGGAGAAGATGTCTACTTGATGAATGTCGGAGACAGCCGTGCTGTTGTTGCGCAGCAGCTCGAACCCGATTTCGGGATTGGAAAGCAATATAGAGACTTGGAGAGAATCAATGAAGGGTCACTAAGAGTATTTGAATCCTCTAATGGTGTAGAGTTTGAAAGATTGACAACCTTGGCTTCCCATCAGCTTACAATGGACCACAGCACATACACAGAGGAGGAAGTTCAGAGGATCAAGACTACCCATCCCGACGACCCGTCCGCGATTATGAATGACAGGGTGAAAGGTTATTTGAAAATCACACGGGCGTTCGGAGCTGGTTTTCTCAAACAGCCAAAATGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTTTGTGGGAAATTCACCTTACATCACCTGTGATCCAACACTCTGCCACTATAAACTCAGCCCAACAGACAGATTCTTGATACTATCCTCTGATGGACTCTACCAGTACTTCACCAATGAACAAGCTGTTGCTGAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAATTATTGTTCCGAGCAGCGAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCATGACGATGTTTCGGTAATCGTCATTTCATTCGAAGGGAGAATTTGGAATTCATTGATGTAA | 1980 | 47.07 | MGNRIGKIGRCFAGDGEISRRYDPADIAGDPHDGGFGHSFYYLPPDPVAISDEFITPVAIFRSISGASVSANVSTPLSTSVVDLYPYSTTFDRPAAFDCSNSFASVPLQPVPRQSVSGHSGGFPYSGPIERGFLSGPLASRNESGPIDRGVHSGPIEKSGGGGGDRKQKSKRKNLIGIVKRAISRTISSYKQSENGGATQNQSSVHLSSMAEDDGDGDYFLSGESVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYAAVRKELKGLIWNEKFDSTATSSSMNSSNSASTEEEDRTTTHMKNHQQSTEKTERVYNTNYRTSQLMKKADQNPKNWKCEWERERLDRQFDHQHHQIWNESTAINHSEVLNVLSQALRKTEEAYLQNADKMVTRNPELALMGSCVMVMMMRGEDVYLMNVGDSRAVVAQQLEPDFGIGKQYRDLERINEGSLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKTTHPDDPSAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDFVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEQAVAEVESFIASFPEGDPAQHLIEELLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVIVISFEGRIWNSLM | 659 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4825772 | 4828986 | - | Sed0024125.1 | Sed14g0488 | 736206 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 189 | 211 | - | - | |
Sed14g0488 | 659 | SUPERFAMILY | PP2C-like | 231 | 651 | IPR036457 | - | |
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 290 | 324 | - | - | |
Sed14g0488 | 659 | FunFam | Protein phosphatase 2C 29 | 207 | 657 | - | - | |
Sed14g0488 | 659 | SMART | PP2C_4 | 210 | 648 | IPR001932 | - | |
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 134 | 171 | - | - | |
Sed14g0488 | 659 | Gene3D | - | 188 | 656 | IPR036457 | - | |
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 290 | 305 | - | - | |
Sed14g0488 | 659 | CDD | PP2Cc | 369 | 650 | IPR001932 | - | |
Sed14g0488 | 659 | ProSiteProfiles | PPM-type phosphatase domain profile. | 220 | 650 | IPR001932 | - | |
Sed14g0488 | 659 | PANTHER | PROTEIN PHOSPHATASE 2C | 210 | 650 | IPR015655 | GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro) | |
Sed14g0488 | 659 | Pfam | Protein phosphatase 2C | 364 | 605 | IPR001932 | - | |
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 189 | 209 | - | - | |
Sed14g0488 | 659 | MobiDBLite | consensus disorder prediction | 306 | 322 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed04g0819 | Sed-Chr4:6845396 | Sed14g0488 | Sed-Chr14:4825772 | 6.30E-123 | dispersed | |
Sed12g0833 | Sed-Chr12:5144162 | Sed14g0488 | Sed-Chr14:4825772 | 1.10E-65 | dispersed | |
Sed12g0834 | Sed-Chr12:5144162 | Sed14g0488 | Sed-Chr14:4825772 | 1.10E-65 | dispersed | |
Sed14g0488 | Sed-Chr14:4825772 | Sed14g0489 | Sed-Chr14:4825772 | 0.00E+00 | tandem | |
Sed14g0488 | Sed-Chr14:4825772 | Sed05g2962 | Sed-Chr5:40379294 | 3.60E-183 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed14g0488 | - | - | - | 0.0 |