Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0488 ATGGGAAATCGAATTGGGAAAATTGGCCGTTGTTTCGCCGGCGACGGCGAAATCTCCCGCCGGTATGATCCCGCCGACATTGCCGGCGACCCCCACGACGGCGGTTTCGGCCACTCTTTCTACTACCTCCCACCTGATCCAGTTGCTATCTCCGACGAGTTCATCACTCCGGTGGCAATTTTCAGGTCAATCTCCGGCGCCTCTGTTAGCGCCAACGTCTCAACGCCGCTCTCGACTTCCGTCGTTGATCTATATCCTTATAGCACGACGTTTGATCGCCCCGCCGCGTTCGATTGCTCGAATTCGTTCGCCTCCGTCCCGCTTCAGCCGGTGCCCCGACAGTCTGTGTCGGGGCATTCCGGTGGGTTCCCTTATTCGGGTCCGATTGAAAGAGGGTTCTTGTCCGGACCTTTGGCGAGCCGGAATGAATCGGGTCCGATCGACCGCGGGGTTCATTCCGGACCGATTGAAAAGAGCGGCGGAGGCGGCGGCGATAGGAAACAGAAATCTAAAAGAAAAAATCTAATTGGGATTGTGAAGAGAGCCATATCAAGAACAATTTCTTCTTACAAACAGAGTGAAAATGGTGGAGCTACTCAGAATCAAAGCAGCGTCCATTTGAGCTCGATGGCGGAAGACGATGGCGATGGCGATTACTTTCTCTCCGGCGAGAGCGTACAGTGGGCACAGGGGAAAGCCGGCGAGGACAGAGTACATGTGGTGATATCCGAGGATAACGGTTGGGTTTTCGTCGGGATTTACGACGGATTCAACGGTCCCGATGCTCCGGATTACTTACTCGCCAATCTCTACGCCGCGGTTCGTAAAGAACTCAAGGGCTTGATTTGGAATGAGAAGTTTGATTCAACTGCAACTTCATCTTCCATGAATTCATCAAACTCTGCTTCAACAGAGGAAGAAGATAGAACAACAACCCACATGAAAAATCATCAACAATCTACAGAGAAAACAGAGAGAGTTTACAATACAAATTACAGGACAAGTCAATTGATGAAGAAAGCTGATCAGAATCCCAAGAACTGGAAATGTGAATGGGAAAGGGAAAGATTAGATAGACAATTTGATCATCAACATCACCAAATATGGAATGAATCAACAGCAATCAATCATTCTGAAGTGTTGAATGTTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTACAAAATGCAGACAAGATGGTGACAAGAAATCCTGAGCTGGCTCTAATGGGTTCTTGTGTTATGGTTATGATGATGAGAGGAGAAGATGTCTACTTGATGAATGTCGGAGACAGCCGTGCTGTTGTTGCGCAGCAGCTCGAACCCGATTTCGGGATTGGAAAGCAATATAGAGACTTGGAGAGAATCAATGAAGGGTCACTAAGAGTATTTGAATCCTCTAATGGTGTAGAGTTTGAAAGATTGACAACCTTGGCTTCCCATCAGCTTACAATGGACCACAGCACATACACAGAGGAGGAAGTTCAGAGGATCAAGACTACCCATCCCGACGACCCGTCCGCGATTATGAATGACAGGGTGAAAGGTTATTTGAAAATCACACGGGCGTTCGGAGCTGGTTTTCTCAAACAGCCAAAATGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTTTGTGGGAAATTCACCTTACATCACCTGTGATCCAACACTCTGCCACTATAAACTCAGCCCAACAGACAGATTCTTGATACTATCCTCTGATGGACTCTACCAGTACTTCACCAATGAACAAGCTGTTGCTGAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAATTATTGTTCCGAGCAGCGAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCATGACGATGTTTCGGTAATCGTCATTTCATTCGAAGGGAGAATTTGGAATTCATTGATGTAA 1980 47.07 MGNRIGKIGRCFAGDGEISRRYDPADIAGDPHDGGFGHSFYYLPPDPVAISDEFITPVAIFRSISGASVSANVSTPLSTSVVDLYPYSTTFDRPAAFDCSNSFASVPLQPVPRQSVSGHSGGFPYSGPIERGFLSGPLASRNESGPIDRGVHSGPIEKSGGGGGDRKQKSKRKNLIGIVKRAISRTISSYKQSENGGATQNQSSVHLSSMAEDDGDGDYFLSGESVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYAAVRKELKGLIWNEKFDSTATSSSMNSSNSASTEEEDRTTTHMKNHQQSTEKTERVYNTNYRTSQLMKKADQNPKNWKCEWERERLDRQFDHQHHQIWNESTAINHSEVLNVLSQALRKTEEAYLQNADKMVTRNPELALMGSCVMVMMMRGEDVYLMNVGDSRAVVAQQLEPDFGIGKQYRDLERINEGSLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKTTHPDDPSAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDFVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEQAVAEVESFIASFPEGDPAQHLIEELLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVIVISFEGRIWNSLM 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4825772 4828986 - Sed0024125.1 Sed14g0488 736206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0488 659 MobiDBLite consensus disorder prediction 189 211 - -
Sed14g0488 659 SUPERFAMILY PP2C-like 231 651 IPR036457 -
Sed14g0488 659 MobiDBLite consensus disorder prediction 290 324 - -
Sed14g0488 659 FunFam Protein phosphatase 2C 29 207 657 - -
Sed14g0488 659 SMART PP2C_4 210 648 IPR001932 -
Sed14g0488 659 MobiDBLite consensus disorder prediction 134 171 - -
Sed14g0488 659 Gene3D - 188 656 IPR036457 -
Sed14g0488 659 MobiDBLite consensus disorder prediction 290 305 - -
Sed14g0488 659 CDD PP2Cc 369 650 IPR001932 -
Sed14g0488 659 ProSiteProfiles PPM-type phosphatase domain profile. 220 650 IPR001932 -
Sed14g0488 659 PANTHER PROTEIN PHOSPHATASE 2C 210 650 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Sed14g0488 659 Pfam Protein phosphatase 2C 364 605 IPR001932 -
Sed14g0488 659 MobiDBLite consensus disorder prediction 189 209 - -
Sed14g0488 659 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0819 Sed-Chr4:6845396 Sed14g0488 Sed-Chr14:4825772 6.30E-123 dispersed
Sed12g0833 Sed-Chr12:5144162 Sed14g0488 Sed-Chr14:4825772 1.10E-65 dispersed
Sed12g0834 Sed-Chr12:5144162 Sed14g0488 Sed-Chr14:4825772 1.10E-65 dispersed
Sed14g0488 Sed-Chr14:4825772 Sed14g0489 Sed-Chr14:4825772 0.00E+00 tandem
Sed14g0488 Sed-Chr14:4825772 Sed05g2962 Sed-Chr5:40379294 3.60E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0488 - - - 0.0