Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0489 ATGGGAAATCGAATTGGGAAAATTGGCCGTTGTTTCGCCGGCGACGGCGAAATCTCCCGCCGGTATGATCCCGCCGACATTGCCGGCGACCCCCACGACGGCGGTTTCGGCCACTCTTTCTACTACCTCCCACCTGATCCAGTTGCTATCTCCGACGAGTTCATCACTCCGGTGGCAATTTTCAGGTCAATCTCCGGCGCCTCTGTTAGCGCCAACGTCTCAACGCCGCTCTCGACTTCCGTCGTTGATCTATATCCTTATAGCACGACGTTTGATCGCCCCGCCGCGTTCGATTGCTCGAATTCGTTCGCCTCCGTCCCGCTTCAGCCGGTGCCCCGACAGTCTGTGTCGGGGCATTCCGGTGGGTTCCCTTATTCGGGTCCGATTGAAAGAGGGTTCTTGTCCGGACCTTTGGCGAGCCGGAATGAATCGGGTCCGATCGACCGCGGGGTTCATTCCGGACCGATTGAAAAGAGCGGCGGAGGCGGCGGCGATAGGAAACAGAAATCTAAAAGAAAAAATCTAATTGGGATTGTGAAGAGAGCCATATCAAGAACAATTTCTTCTTACAAACAGAGTGAAAATGGTGGAGCTACTCAGAATCAAAGCAGCGTCCATTTGAGCTCGATGGCGGAAGACGATGGCGATGGCGATTACTTTCTCTCCGGCGAGAGCGTACAGTGGGCACAGGGGAAAGCCGGCGAGGACAGAGTACATGTGGTGATATCCGAGGATAACGGTTGGGTTTTCGTCGGGATTTACGACGGATTCAACGGTCCCGATGCTCCGGATTACTTACTCGCCAATCTCTACGCCGCGGTTCGTAAAGAACTCAAGGGCTTGATTTGGAATGAGAAGTTTGATTCAACTGCAACTTCATCTTCCATGAATTCATCAAACTCTGCTTCAACAGAGGAAGAAGATAGAACAACAACCCACATGAAAAATCATCAACAATCTACAGAGAAAACAGAGAGAGTTTACAATACAAATTACAGGACAAGTCAATTGATGAAGAAAGCTGATCAGAATCCCAAGAACTGGAAATGTGAATGGGAAAGGGAAAGATTAGATAGACAATTTGATCATCAACATCACCAAATATGGAATGAATCAACAGCAATCAATCATTCTGAAGTGTTGAATGTTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATCTACAAAATGCAGACAAGATGGTGACAAGAAATCCTGAGCTGGCTCTAATGGGTTCTTGTGTTATGGTTATGATGATGAGAGGAGAAGATGTCTACTTGATGAATGTCGGAGACAGCCGTGCTGTTGTTGCGCAGCAGCTCGAACCCGATTTCGGGATTGGAAAGCAATATAGAGACTTGGAGAGAATCAATGAAGGGTCACTAAGAGTATTTGAATCCTCTAATGGTGTAGAGTTTGAAAGATTGACAACCTTGGCTTCCCATCAGCTTACAATGGACCACAGCACATACACAGAGGAGGAAGTTCAGAGGATCAAGACTACCCATCCCGACGACCCGTCCGCGATTATGAATGACAGGGTGAAAGGTTATTTGAAAATCACACGGGCGTTCGGAGCTGGTTTTCTCAAACAGCCAAAATGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTTTGTGGGAAATTCACCTTACATCACCTGTGATCCAACACTCTGCCACTATAAACTCAGCCCAACAGACAGATTCTTGATACTATCCTCTGATGGACTCTACCAGTACTTCACCAATGAACAAGCTGTTGCTGAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAATTATTGTTCCGAGCAGCGAAAAAATACGGTAAGCTCCTCATCTGTCAACACAAGTAG 1893 47.17 MGNRIGKIGRCFAGDGEISRRYDPADIAGDPHDGGFGHSFYYLPPDPVAISDEFITPVAIFRSISGASVSANVSTPLSTSVVDLYPYSTTFDRPAAFDCSNSFASVPLQPVPRQSVSGHSGGFPYSGPIERGFLSGPLASRNESGPIDRGVHSGPIEKSGGGGGDRKQKSKRKNLIGIVKRAISRTISSYKQSENGGATQNQSSVHLSSMAEDDGDGDYFLSGESVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYAAVRKELKGLIWNEKFDSTATSSSMNSSNSASTEEEDRTTTHMKNHQQSTEKTERVYNTNYRTSQLMKKADQNPKNWKCEWERERLDRQFDHQHHQIWNESTAINHSEVLNVLSQALRKTEEAYLQNADKMVTRNPELALMGSCVMVMMMRGEDVYLMNVGDSRAVVAQQLEPDFGIGKQYRDLERINEGSLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKTTHPDDPSAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDFVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYFTNEQAVAEVESFIASFPEGDPAQHLIEELLFRAAKKYGKLLICQHK 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4825772 4828986 - Sed0024125.2 Sed14g0489 736207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0489 630 MobiDBLite consensus disorder prediction 189 211 - -
Sed14g0489 630 MobiDBLite consensus disorder prediction 290 324 - -
Sed14g0489 630 MobiDBLite consensus disorder prediction 134 171 - -
Sed14g0489 630 MobiDBLite consensus disorder prediction 290 305 - -
Sed14g0489 630 CDD PP2Cc 369 623 IPR001932 -
Sed14g0489 630 ProSiteProfiles PPM-type phosphatase domain profile. 220 630 IPR001932 -
Sed14g0489 630 SUPERFAMILY PP2C-like 231 614 IPR036457 -
Sed14g0489 630 Pfam Protein phosphatase 2C 366 601 IPR001932 -
Sed14g0489 630 MobiDBLite consensus disorder prediction 189 209 - -
Sed14g0489 630 PANTHER PROTEIN PHOSPHATASE 2C 207 612 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Sed14g0489 630 Gene3D - 188 628 IPR036457 -
Sed14g0489 630 SMART PP2C_4 210 626 IPR001932 -
Sed14g0489 630 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g2962 Sed-Chr5:40379294 Sed14g0489 Sed-Chr14:4825772 1.60E-162 dispersed
Sed14g0488 Sed-Chr14:4825772 Sed14g0489 Sed-Chr14:4825772 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0489 - - - 0.0