Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0522 ATGAAAACCGATCTCCTATTTCTTCTCATTTTATTCTCATTCTTCTTCAGCAGTCTGGCCAAGCGCTGCCCGGACTGCGGCCGCACGCCGGTGCCGTACCCACTAGCCACGGCACCGGATTGCGGCCATCCTCTTTACAGAGTCGTCCGGTGCACCGCCGGCGTCCTCTGGTTCGAATCCGTAAATGGGTCTTCCTATTTGATCACATCCGTTAATCCGGCGGCTCAGAGGCTGATTTTCCGGCCGCCGGAGTTGGCCAAAAACGCCTGCATTTCGCCGGATTTTGGGAGCCATGGATTTTGGCTCGACGCCGGTCATCCTTTCAGCATTACCAATAGAACCACGGTTCTGCTCTTCAATTGTTCGATTCAAGTCGTCGAAAATGGTTGGAACTGTTCGTCTAATAGTATCTGTCACGACTTTATCCGGCGGAATCCGGCGACCATGGCGGCGTGTAAGGCGGCGCCGACGTGTTGTTGGTACAAAAGTGGTGGGTCCATGTCGGGATTGAGGAAGGAGCGGTGTTCGGCTTATGAGAGTTTTGTGGATTTGGGTGGTTCTGTTCCGGCGAAGAAGTGGCAGGAATCTGGGGTGGAGATTCAATGGGCGCCGCCGCGAGAACCGCCGTGTCGGGTGGCTTCGGATTGCCGGAACTGGGAGAATTCTGATTGTTTGCCGGAACCTGCAAATGGTCGCCAGAGGAGGTGTTTCTGCAAGTTGCCTTTCAAGTGGGATCCTCTTAATGGCTTGTGTTATGGCAACAATGTGAAAATACAGAACAAGAAAACTTACAAGAAGCATAAGAAGATGCCTGCTATTCTTGGAGCAATTGCGGGAGTAATCGTCATGATAATTGGAGGTTCGACCGGGTTTATAGTTTTCAAAAGACGTCGACAGATTCCAAACCGAAACAAACTTAAATCGAAACAAGTTCGTGAAGTTATGCTAAGTGCCAACAGCAGTGGCAAATCAGCAAGGATGTTCACAACCAAAGAGATAGCAAAGGCCACAAACAACTTCTCAAAAGAGAACTTGCTTGGCTCTGGTGGCTATGGAGAGGTCTTCAAAGGCAGCCTAGAAGACGGAACGTTAGTAGCGGTTAAGCGTGCCAAGTTGGGGTGCATGAAGGGTATCGATCAAATCCTGAATGAAGTTCGAATTCTTTGCCAGGTTAACCATCGATATCTTGTTCGTCTACTTGGATGTTGTCTCGAACTTGAGCAACCCCTGTTAATCTACGAGTACATATCAAACGGGAACCTATTTGATCACCTTCATGGGAATACAAGCTCAAGCAAATGGCCACCACTGACATTGAGTCGTCGACTCTACATTGCTCATCAAACAGCCAACGGCCTTGCGTACCTACACACTTCAGCCATGCCAAGAATCTATCATCGAGACATAAAATCGAGCAATATTCTACTAGACGAGAAGTTGAACGCTAAAGTTGCCGATTTCGGGCTTTCTAGATTGGCTGTTACAGAATCAAGCCATATAACAACTGGGGCTCAGGGAACATTAGGTTATCTAGACCCAGAATATTACTTGAACTTTCAACTGACAGACAAAAGCGATGTTTATAGTTTTGGAGTCGTGATGTTAGAGCTATTGACTTCTGAGAAAGCCATTGATTTCAACAGAGAAGAGGAAGATGTAAACTTGGTAGTTTATATAAAGAAGATCATCAAAGAAGACAGATTGATGGAGGTTGTTGATCCTGTGATTAAAGAGAGAGCAAGCAGAGTTGAAATAGAGATAATGAAAGCATTAGGTTCTCTGGCAGCAGCTTGCTTGGATGAAAAGAGGCAGTTCAGACCTGCCATGAAAGAAGTTGCTGATGAGCTAGCCAATATTATTTCAATTCTTAACAGTGAGGTCCCAAATATTAACCAACTGTAA 1902 46.58 MKTDLLFLLILFSFFFSSLAKRCPDCGRTPVPYPLATAPDCGHPLYRVVRCTAGVLWFESVNGSSYLITSVNPAAQRLIFRPPELAKNACISPDFGSHGFWLDAGHPFSITNRTTVLLFNCSIQVVENGWNCSSNSICHDFIRRNPATMAACKAAPTCCWYKSGGSMSGLRKERCSAYESFVDLGGSVPAKKWQESGVEIQWAPPREPPCRVASDCRNWENSDCLPEPANGRQRRCFCKLPFKWDPLNGLCYGNNVKIQNKKTYKKHKKMPAILGAIAGVIVMIIGGSTGFIVFKRRRQIPNRNKLKSKQVREVMLSANSSGKSARMFTTKEIAKATNNFSKENLLGSGGYGEVFKGSLEDGTLVAVKRAKLGCMKGIDQILNEVRILCQVNHRYLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSSSKWPPLTLSRRLYIAHQTANGLAYLHTSAMPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAVTESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIKEDRLMEVVDPVIKERASRVEIEIMKALGSLAAACLDEKRQFRPAMKEVADELANIISILNSEVPNINQL 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5123961 5126641 - Sed0010831.1 Sed14g0522 736240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0522 633 Pfam Protein tyrosine and serine/threonine kinase 343 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0522 633 CDD STKc_IRAK 346 619 - -
Sed14g0522 633 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524(InterPro)
Sed14g0522 633 CDD TM_EGFR-like 275 300 - -
Sed14g0522 633 ProSiteProfiles Protein kinase domain profile. 340 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0522 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0522 633 Gene3D Phosphorylase Kinase; domain 1 300 415 - -
Sed14g0522 633 FunFam Wall-associated receptor kinase-like 20 302 415 - -
Sed14g0522 633 SUPERFAMILY Protein kinase-like (PK-like) 322 616 IPR011009 -
Sed14g0522 633 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 619 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Sed14g0522 633 Gene3D Transferase(Phosphotransferase) domain 1 416 629 - -
Sed14g0522 633 SMART serkin_6 340 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0522 633 FunFam Wall-associated receptor kinase-like 20 416 628 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g0393 Sed-Chr11:3773318 Sed14g0522 Sed-Chr14:5123961 2.20E-30 dispersed
Sed11g2208 Sed-Chr11:35672717 Sed14g0522 Sed-Chr14:5123961 4.30E-170 dispersed
Sed12g1954 Sed-Chr12:30594098 Sed14g0522 Sed-Chr14:5123961 6.10E-68 dispersed
Sed14g0522 Sed-Chr14:5123961 Sed14g0796 Sed-Chr14:14053184 1.90E-69 dispersed
Sed14g0522 Sed-Chr14:5123961 Sed02g0586 Sed-Chr2:43527057 4.70E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80147 PF07714 PK_Tyr_Ser-Thr 1.90E-45 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0522 - - - 0.0