Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0535 ATGGCTGCTTTCGCTCTGACCCCCGCCTCCGCCGACGAGCTCAACCAACGCAACCACCAGACTGTTCACATTCAAGCCTCCCAACCGCCGCCCTCGGCCGTAAAAATGGTGCGGAAGAGAATCGCGTCCGAGATGGAGATCGAGGAACCGAGGTTTTTCCGGCGGAGTTTGGGTTCCGGCCGGTCGTTTACAGGCGATGGTAATAACAGTAAGGTGAATGGCAATAGTAACAATGTTTATTGCTGTTCCTCTTCTTCTTCAAACCCTAGCCATGGCGGCGGCGGCAATGGCAACAATAACAATAACAATAACAATAACAATAACAACCACTCCACTTCGGTTCTTAATTTGGCTTCTCTTACGTCAGTTGTTATGGAACCGTCTAATTTGTCGAATCCTTTAAGTTCTGATGTTGCTGCTTCGTCTTCCATCAACAACTCCGTTATCGATTGTTCGATTCCGGTCGTTCTTCGTCCTCCGGTCTGTGGTTTCTCCGGTTTGCCCTTGTTTCCGCCGGAATCGAATCCATGTCAGGTTGTTCTTCACAATAATCTTCCTAATTCTTCCTCCTCCGCCGCCGTCGTCGCCGCCGTGTCGCCGCCGATGGACGATTCCTCCGCCGCCACCGCTTGGATCGACGGGATCATCAAGGATTTGATTCACAGCTCCACCGCCGTTTCGATTCCTCAGCTTATTCAAAACGTTCGTGATATTATTTTTCCTTGTAACCCAAATCTCGCCAACCTTCTTGAGTTTCGTCTTCGTTCTTTGACGGATCCGGGATTTGTTGCTGAGGATCAACGGGTGAGGAAGTCGCCGGCGCCGTTGCCGTTGCCGGTGGCTGGGTTGGGACTGCCGCCGCAAAGGCAGTTTAGCCACGAACAAGTTCAACCACAACAACAACAACAGCATCAAGAACAGGATTGTTCTGGGTTGAAGCTTAATCTTGATTCTTCATCTTTGAATAATCTTCCTGGTTTTTCGTTTCAGCCGCCGTTTCACGAGCAGTATCTTCCGTGGGGAGCTGCGGTCACGGGCTCCGCCGCCGTTATCGGCGGCGGAGATACTCAGCCATCTATTGTTGGTTTAAACCATGTCCCCTCCAAACCACCACAACCCGAACAGCAGAAGGTGGCGGTGGTGTCGGCAGCTGCACCACCGCCACCGCCCTCGTCGACAGGTAATAATAACCCGTCGACGACGGCGTTGTTGATTAGGGAGATAAAAGAGGAGATGAGGCAACAGAAGAGAGATGAAGAAGGGTTGCATCTCTTGACTTTGCTACTTCAATGTGCTGAAGCTGTTTCTGCTGATAATTTAGAAGAAGCTAATAAGATGTTGTTGGAAATCTCTGAATTGTCGACGCCGTTCGGCACGTCGGCGCAGAGGGTGGCGGCGTATTTCTCGGAAGCGATGTCGGCCAGGCTTGTGAGTTCGTGTTTAGGCATTTACGCCGCGCTGCCGCCGACGTTGGTGCCGCATACGCACAGCCAGAAGATAGCCTCCGCCTTCCAGGTCTTCAATGGCATTAGCCCTTTTGTCAAATTCTCGCACTTCACTGCCAATCAAGCGATCCAAGAAGCCTTTGAAAGGGAAGAAAGAGTTCACATTATAGATCTAGACATCATGCAAGGCCTACAGTGGCCTGGCCTCTTCCACATCTTGGCGTCTCGGCCTGGCGGGCCGCCGTATGTTCGCCTCACTGGGCTCGGTACGTCGCAGGAGGTTCTCGAAGCCACCGGCAAACGCCTCACTGAATTCGCGGAGAAACTCGGCCTTCCGTTTGATTTCTTTCCTGTTACAGATAAAATTGGCAATCTCGACTTGGAGAAGCTCAACGTGAGCAAAAGAGAAGCTGTTGCCGTCCATTGGATGCAACATTCTCTTTATGAAGTCACTGGTTCTGATTCCAACACGCTATGGCTTTTGCAAAGATTGGCTCCAAAAGTGGTGACGGTTGTGGAACAAGATCTGAGCCACACAGGCTCATTCTTGGGAAGATTCGTAGAGGCAATTCATTACTATTCAGCACTGTTCGACTCATTGGGCGTAAGCTATGGCGAAGAGAGTGAAGAGAGGCACTTAGTCGAGCAGCAACTGTTGTCGAGGGAGATTCGAAACGTGCTGGCAGTTGGCGGGCCGTCGAGGAGCGGCGAAGTGAAGTTTCAAAACTGGAGAGAAAAGCTGCAGCAATCAGGGTTCAAGGGCATTTCGCTCGCCGGAAATGCTGCGACTCAGGCGACGCTTCTCCTCGGAATGTTCCCTTCGGATGGATATACGCTTGTGGAAGACAATGGGACATTGAAGCTTGGATGGAAGGATCTTTGCTTGCTGACAGCGTCGGCTTGGAAGCCGCCGTTTCATCACCACGCTCCGGCGGTGGCGGTGGCCAACAACCACATTCCCCGGTACTGA 2415 51.8 MAAFALTPASADELNQRNHQTVHIQASQPPPSAVKMVRKRIASEMEIEEPRFFRRSLGSGRSFTGDGNNSKVNGNSNNVYCCSSSSSNPSHGGGGNGNNNNNNNNNNNNHSTSVLNLASLTSVVMEPSNLSNPLSSDVAASSSINNSVIDCSIPVVLRPPVCGFSGLPLFPPESNPCQVVLHNNLPNSSSSAAVVAAVSPPMDDSSAATAWIDGIIKDLIHSSTAVSIPQLIQNVRDIIFPCNPNLANLLEFRLRSLTDPGFVAEDQRVRKSPAPLPLPVAGLGLPPQRQFSHEQVQPQQQQQHQEQDCSGLKLNLDSSSLNNLPGFSFQPPFHEQYLPWGAAVTGSAAVIGGGDTQPSIVGLNHVPSKPPQPEQQKVAVVSAAAPPPPPSSTGNNNPSTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPTLVPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVTDKIGNLDLEKLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHHAPAVAVANNHIPRY 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5374746 5378241 - Sed0021631.1 Sed14g0535 736253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0535 804 MobiDBLite consensus disorder prediction 290 309 - -
Sed14g0535 804 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 407 783 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Sed14g0535 804 MobiDBLite consensus disorder prediction 84 112 - -
Sed14g0535 804 Pfam GRAS domain family 425 784 IPR005202 -
Sed14g0535 804 ProSiteProfiles GRAS family profile. 415 784 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0281 Sed-Chr7:2261444 Sed14g0535 Sed-Chr14:5374746 2.40E-93 dispersed
Sed10g0719 Sed-Chr10:5020101 Sed14g0535 Sed-Chr14:5374746 7.00E-35 dispersed
Sed11g2281 Sed-Chr11:35982823 Sed14g0535 Sed-Chr14:5374746 3.50E-82 dispersed
Sed13g0711 Sed-Chr13:4944499 Sed14g0535 Sed-Chr14:5374746 2.20E-125 dispersed
Sed14g0002 Sed-Chr14:116253 Sed14g0535 Sed-Chr14:5374746 8.20E-31 dispersed
Sed14g0535 Sed-Chr14:5374746 Sed03g1315 Sed-Chr3:8438814 6.10E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40552 PF03514 GRAS 7.50E-127 CL0063 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0535 K27742 - csv:101205286 1053.12