Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0553 ATGATGCCGATGAGGGGTCGTGTGTTCGTTTTTCTGCTGTCGTGTTGCTGCTTCCTTCTTCTTGCTGGTGCTGCAACCACAGAGCCATCAGATGTTAAAGCATTGCTAGCAGTAAGGGGCAGTCTAATTGATCCTCTGGGCCGTCTTAAAAACTGGAACGAGGGAGATCCTTGCACAAATAATTGGATTGGAGTAGTATGCAACGTTTCCAATGGAGATTTTGGGAACTTACGTGTCACAGAACTCCAGCTATTGAATATGAACCTATCTGGAAGCTTATCCCCTGAGATCGGCCAATTGTCTGAACTTGAGAAGTTAGATTTCATGTGGAATGTCCTAACTGGTTCAATTCCGAAGGAGATTGGCAGTATTGGGTCGCTGAAACTCTTACTCTTAAATGGAAATCAACTGTCCGGTTCTCTTCCACATGAGCTTGGTAAGCTTACAAAGCTCATCCGGTTCCAAATAGATGAGAATCAAATTTCAGGGCCTATTCCAAAATCATATGCTAACTTGAGCAGCATGAAGCACCTCCACTTCAATAACAACACACTAAGTGGTGAAGTTCCATCTGAGCTTTTCGCATTACCGGAGCTTATTCACTTGCTTTTGGATAACAACAACTTGTCAGGCTCTCTGCCACCAGAATTTTCAAAAATGAAAAAGCTAAGCATTCTGCAACTTGATAACAACAACTTCAAAGGAGAAATTCCAGCATCTTATGAGAATTTTTCTACATTAGTGAAATTAAGTCTCAGGAATTGCAGCTTGGAGGGAACGATTCTTGATTTTAGCAAAATTGCCAACTTCAGTTACTTGGATCTTAGCTGGAATAATTTTACCGGACCCATACCACCATATGACCTCTCTTCTAATATGACAACAATAATTTTGTCACACAACCAGCTGAATGGATCTATACCCAGCAGTTTCTCTGATCTTCCTGTCCTCCAGAAACTGTCACTTGAGAATAACTTCCTGAATGGTTCTGTACCTTCTGCTCTATGGAAGAAAATGTCCTTCAATTCAAGTGGTCGACTTACACTCGATCTTCGGAACAATTTGTTTTCTGGCATTTCTGATAGCACAAGCCCTCCATCTAATGTCACTCTAAGGCTTGATGGAAATCCAATCTGCAAATTTTTAAGGGGTCAAAACTCTAACCCGCTCTGTGCATCTAAAATTGTAGAGGATGGGCTGCTTACAAGCTCAAGGAACTTCAATGAAACATGTCCAGTTAGAGGCTGTCCAACAGATAGTTTTTTTGAATATGTGCCTGACACTCCAGACCCATGTTTTTGTGCATCACCCCTTGGAATTGGATATAGGCTGAAGAGTCCCAGTTTTTCCTACTTCCCTCTATATAGACATTTATTTCAAACTTATGTGACAAAGGAACTCAATTTGGATGAGCATCAATTTTTGATCGATTCATACGAATGGGAAGGATCTCGCATGAGGATGTATCTCAAGATTTTCCCTTTATATGATAGTGGTACTCACATGTTGAATAGTAGTGAGGTATTTCGAATTACAGAAAAATTTATGTCTTGGACTTTTACTCGTGATGACTTCTTTGGTCCGTACGAGCTTCTCAACTTCACATTCCCAGATCTAACGCAGACTGTCATTTTCAAGACCGAGAAGAAGGGGATTGTTTCGGGCGTCTTGGCTGCCATTATAGTTGGATCTATTGCCTGTATTCTTTCGATCATAGCCGTTATCATACTTCTGTTCACTAGGCGTTCCAGTTCCCGTTACCGTCACACTTTGTCAAGGAAAAACTTCTCTTCAAAGATTGGTCTGAAAATTGATGGTGTAAAAGCATTTTCATTCAAGGAAATGCAATCTGCTACTGGAAATTTCAACTGTTCCAGTCAAGTTGGTCGAGGAGGTTATGGCAAGGTCTATAAAGGCATATTATCAGATAATTCAGTTGTAGCCATCAAGCGTGCAGAAGAAGGATCCTTACAAGGACAAAAAGAATTTTTGACGGAAATAGAACTGTTATCGCGAGTACATCACCGAAATTTAGTTTCCCTCATCGGATATTGTGATGAAGAAGGGGAACAAATGCTGGTTTACGAGTTTATGCCGAATCGAACTTTGCGGGACTGGATAACTGGTTATGAATATGCTGCCAAAACAACAGTAAATCTGAATTTTCGTATGAGATTACAAATTGCACTGGGTTCAGCTAAAGGTATACTGTATCTCCACACTGAAGCAAACCCTCCTATATATCACCGGGACATCAAAGCTAGCAACATACTCCTCGATGCAAAGCTCACTGCCAAAGTGGCTGATTTCGGATTGTCGCGTCTTGCTCCTGATCTAGATTATGAAGGCGATGTTCCTGGACAGATATCTACTGTTGTGAAGGGTACCCCAGGTTATCTTGATCCAGAGTACTTTTTAACTCATAAATTGACAGACAAAAGTGATGTATATAGCCTAGGCGTTGTGTTCTTGGAGCTCTTGACGGGTATGCATCCTATTTCACACGGCAAAAACATTGTTCGTGAGGTAAAATTGGCACATCAAATGGAAACGATTCTTTCGATTGTTGACACAAGATTGGGTTCTTTCCAACCCGAATGTTTAGAGAAGTTTGTTGCCTTATCCCTCAGTTGCTGCCATGACAAGCCTGAAGAGCGGCCATCCATGCTAATTGTCGTAAGGGAGTTGGAGAACATACTCAACATCATGTCCGACGATTCCAGTGCCTCGTATTCGGACTTTTCCCTGAGATCAAGTACCAGGCTTCCATCCTCACCGGCATCATCCCCGTCCATCTCCCGAGACCAGTTTGCATCAGGAAACATTTCGGGGAGCGATCTCGTTAGTGGCGTTGTGCCAACGATCAGACCTCGTTGA 2877 41.99 MMPMRGRVFVFLLSCCCFLLLAGAATTEPSDVKALLAVRGSLIDPLGRLKNWNEGDPCTNNWIGVVCNVSNGDFGNLRVTELQLLNMNLSGSLSPEIGQLSELEKLDFMWNVLTGSIPKEIGSIGSLKLLLLNGNQLSGSLPHELGKLTKLIRFQIDENQISGPIPKSYANLSSMKHLHFNNNTLSGEVPSELFALPELIHLLLDNNNLSGSLPPEFSKMKKLSILQLDNNNFKGEIPASYENFSTLVKLSLRNCSLEGTILDFSKIANFSYLDLSWNNFTGPIPPYDLSSNMTTIILSHNQLNGSIPSSFSDLPVLQKLSLENNFLNGSVPSALWKKMSFNSSGRLTLDLRNNLFSGISDSTSPPSNVTLRLDGNPICKFLRGQNSNPLCASKIVEDGLLTSSRNFNETCPVRGCPTDSFFEYVPDTPDPCFCASPLGIGYRLKSPSFSYFPLYRHLFQTYVTKELNLDEHQFLIDSYEWEGSRMRMYLKIFPLYDSGTHMLNSSEVFRITEKFMSWTFTRDDFFGPYELLNFTFPDLTQTVIFKTEKKGIVSGVLAAIIVGSIACILSIIAVIILLFTRRSSSRYRHTLSRKNFSSKIGLKIDGVKAFSFKEMQSATGNFNCSSQVGRGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIELLSRVHHRNLVSLIGYCDEEGEQMLVYEFMPNRTLRDWITGYEYAAKTTVNLNFRMRLQIALGSAKGILYLHTEANPPIYHRDIKASNILLDAKLTAKVADFGLSRLAPDLDYEGDVPGQISTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVKLAHQMETILSIVDTRLGSFQPECLEKFVALSLSCCHDKPEERPSMLIVVRELENILNIMSDDSSASYSDFSLRSSTRLPSSPASSPSISRDQFASGNISGSDLVSGVVPTIRPR 958
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5575599 5588078 - Sed0007006.1 Sed14g0553 736271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0553 958 FunFam Leucine-rich repeat receptor-like kinase 30 143 - -
Sed14g0553 958 Gene3D Phosphorylase Kinase; domain 1 593 697 - -
Sed14g0553 958 Gene3D Ribonuclease Inhibitor 189 288 IPR032675 -
Sed14g0553 958 Gene3D Transferase(Phosphotransferase) domain 1 698 919 - -
Sed14g0553 958 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Sed14g0553 958 FunFam Leucine-rich repeat protein kinase family protein 586 697 - -
Sed14g0553 958 ProSiteProfiles Protein kinase domain profile. 622 900 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0553 958 MobiDBLite consensus disorder prediction 920 948 - -
Sed14g0553 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0553 958 MobiDBLite consensus disorder prediction 920 958 - -
Sed14g0553 958 CDD STKc_IRAK 628 899 - -
Sed14g0553 958 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524(InterPro)
Sed14g0553 958 SUPERFAMILY L domain-like 27 286 - -
Sed14g0553 958 Gene3D Ribonuclease Inhibitor 289 397 IPR032675 -
Sed14g0553 958 SMART serkin_6 622 903 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0553 958 SUPERFAMILY Protein kinase-like (PK-like) 607 926 IPR011009 -
Sed14g0553 958 Pfam Leucine Rich Repeat 199 220 IPR001611 GO:0005515(InterPro)
Sed14g0553 958 Pfam Leucine Rich Repeat 271 286 IPR001611 GO:0005515(InterPro)
Sed14g0553 958 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515(InterPro)
Sed14g0553 958 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515(InterPro)
Sed14g0553 958 SUPERFAMILY L domain-like 264 380 - -
Sed14g0553 958 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 144 236 - -
Sed14g0553 958 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Sed14g0553 958 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 912 - -
Sed14g0553 958 PANTHER RECEPTOR-LIKE PROTEIN 55 44 897 - -
Sed14g0553 958 Pfam Protein kinase domain 624 890 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed04g0242 Sed-Chr4:1798476 Sed14g0553 Sed-Chr14:5575599 4.90E-181 dispersed
Sed04g1067 Sed-Chr4:15291957 Sed14g0553 Sed-Chr14:5575599 1.00E-93 dispersed
Sed14g0553 Sed-Chr14:5575599 Sed06g0864 Sed-Chr6:9725309 1.80E-63 dispersed
Sed14g0553 Sed-Chr14:5575599 Sed02g0147 Sed-Chr2:31344702 5.70E-89 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80150 PF00069 Pkinase 3.90E-46 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0553 - - - 0.0