Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed14g0568 ATGAACGGAATTCGCGATTTCCGTTTCGTGTTTGCATTTGCATCGGTTTTTGTTTTCGTTTGCTTGTTCTTCGATGTTCGTGTTGTTTTAGCGAAAAATTACATCCCTAGGGATTTCATTCTCCTCAATTGTGGAGGACCGACGACTGCGAACGACATCGATAACCGGAAATGGATGTCCGATGACAGATCTATGTTTGTTCCGGCGACTGGAGATAGCACCCCGTCGAAAGCGGCAACTCAGGATCCTTCAGTTCCTGAAACTCCGTTCATGTCGGCTAGGGTTTTTCACTCGAATTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGCGTGTTTGTTCGTTTGTACTTTTATCCTTCTTCTTATAGTGGCCTTGATGCTTCTGATGCTCGTTTCTCTGTTTCAACTCAGACTTATACTCTTCTTTCAAACTTCAGCGCTCAACAAACTGCTGAGGCTTTGAATTTTGTGTATATTGTTAAGGAATTTTCGATTAATGTTGTCGATGGGAGGTTGAACTTGACTTTTGTTCCGTCTTCGCGTCATCCGAAGGCGTATGCGTTTGTGAATGGGATTGAGATTGTGTCTATGCCGGATATTTACAGTGAAACTTCTGGGACTGCTATTATTGTTGGTCAATCTAGTCCTTTTACCATCGATAACGCCACTGCTCTTGAGAACGTGTATCGGTTGAATGTTGGGGGGAATGATCTTTCCCCTTCTGCTGATACGGGGATGTATCGGTCTTGGTTTGATGATAGTTCATATTTGTTTGGTGCAGCAATGGGAGTGACGATGAGTACTGATCAGAACACGACGATTAATTATCCGCCGAACATGCCTACTTATGTTGCGCCACTTGATGTCTACTCTACTGCTAGAGCAATGGGACCTGATAGCCATGTTAATCTGAATTATAATTTGACCTGGATTTTCTCTGTTGACTCTGGGTTCTTTTACCTTGTTAGGCTCCATTTCTGTGAGATTGCTGCAAGTATTACTAAAGTTAACCAAAGAGTGTTTGACATATTCATCTTTAATCAAACTGCTATGCCTGGTGCTGATGTGATTGCCTGGGCTGATGGAAGTAATGACACTCCTGTGTACCATGATTATGTGGTTATGGTTCCAGGTGGTGGAAGTCCACAGAAGGATTTGTGGCTCGAACTGCATCCAGACAAGTCTTCGTTGCCCAATTACTATGATGCAATCTTGAATGGAGTGGAGATATTTAAAATTAACAGTTCGGATGGTAATCTTGCTGGGCCGAACCCTATTCCTGCGCCGAAACAGGAAATTATTGATCCGTCATTAGCTAAGCCATCTTCTCATGGTAAATCGGAGAATAAGACGGGGGTTGTTGCTGGTGTTGTTTGTGGTGCAGTTGTGTTAGCTCTGATCATTGGTTTCTTTGTTGTTAAGCGTCGCCGTGGGCGTGGGAAAGATTCTAGTAGTCTTGAAGGACCATCAGGGTGGCTCCCTCTTTCTCTCTATGGAAATTCTCATTCGGCTGGATCTGCCAAAACAAACACAACTGGAAGCTATACATCCTCCCTGCCTTCCAACCTTTGCCGCCACTTCTCATTTTCTGAGATAAAGGCTGCCACAAAGGACTTCGATGAATCTTTGATACTTGGAGTGGGTGGTTTTGGAAAAGTTTACAAGGGAGAAATTGATGGTGGGACTACAAAAGTTGCGATCAAGCGCGGGAACCCTCTCTCCGACCAAGGTGTGAATGAATTTCAAACTGAGATTGAAATGCTCTCCAAGCTTCGTCATCGCCATCTTGTTTCGTTGATTGGATACTGTGAAGAGAATTGTGAAATGATCCTGGTTTATGATTACATGGCTCATGGGACACTTCGAGAACATCTATACAAGACCCAAAAGCCACCATTGTCTTGGAGGCAAAGGCTCGAGATTTGCATCGGAGCTGCGCGTGGTCTGCATTATCTTCATACTGGTGCCAAGTACACAATTATTCACCGAGATGTGAAAACAACCAATATCCTTTTGGACGAAAAGTGGGTGGCAAAGGTATCCGATTTTGGGTTGTCAAAAACTGGTCCTACATTGGATCACACACATGTTAGCACTGTGGTGAAAGGTAGTTTTGGATACTTGGATCCTGAATACTTCAGACGGCAGCAATTGACTGACAAATCAGATGTTTACTCCTTTGGTGTCGTTCTCTTTGAGGTCCTATGCGCTCGGCCAGCCTTGAACCCAACACTTGCTAAGGAGCAAGTGAGTTTAGCCGAATGGGCTGCACATTGCTACAACAAAGGCACTTTAGATCAGATAATTGACACATTCCTAAAAGGGAAGATTGCATCAGAGTGTCTCAAGAAGTTTGCGGAGACAGCAATGAAATGTGTGTCTGATCAGGGGATTGACAGGCCATCAATGGGCGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAAGAGAGTGCAGAAGAGAGCGGCAAGCTAGGCAGCGGGATGGAAATGGAAGATGGTCAGCTCGATGTTGTTTACAAAGGAAAGAAGGATCCTGATGCTTCCTCTGGCATGGATGGAAACATAACCGACTCAAGGAGCACCGGAATCAGTATGAGCATCGGAAGCCGAAGCCTTGCCAGTGAAGATTCCGACGGGTTGACGCCAAGTGCTGTCTTCTCACAGATCATGAACCCAAAAGGTCGTTAA 2694 44.8 MNGIRDFRFVFAFASVFVFVCLFFDVRVVLAKNYIPRDFILLNCGGPTTANDIDNRKWMSDDRSMFVPATGDSTPSKAATQDPSVPETPFMSARVFHSNFTYSFPVAPSRVFVRLYFYPSSYSGLDASDARFSVSTQTYTLLSNFSAQQTAEALNFVYIVKEFSINVVDGRLNLTFVPSSRHPKAYAFVNGIEIVSMPDIYSETSGTAIIVGQSSPFTIDNATALENVYRLNVGGNDLSPSADTGMYRSWFDDSSYLFGAAMGVTMSTDQNTTINYPPNMPTYVAPLDVYSTARAMGPDSHVNLNYNLTWIFSVDSGFFYLVRLHFCEIAASITKVNQRVFDIFIFNQTAMPGADVIAWADGSNDTPVYHDYVVMVPGGGSPQKDLWLELHPDKSSLPNYYDAILNGVEIFKINSSDGNLAGPNPIPAPKQEIIDPSLAKPSSHGKSENKTGVVAGVVCGAVVLALIIGFFVVKRRRGRGKDSSSLEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATKDFDESLILGVGGFGKVYKGEIDGGTTKVAIKRGNPLSDQGVNEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEQVSLAEWAAHCYNKGTLDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKLGSGMEMEDGQLDVVYKGKKDPDASSGMDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5681470 5685424 - Sed0000861.1 Sed14g0568 736286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed14g0568 897 MobiDBLite consensus disorder prediction 844 897 - -
Sed14g0568 897 Pfam Protein tyrosine and serine/threonine kinase 545 807 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0568 897 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Sed14g0568 897 FunFam FERONIA receptor-like kinase 39 198 - -
Sed14g0568 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524(InterPro)
Sed14g0568 897 FunFam Receptor-like protein kinase FERONIA 616 826 - -
Sed14g0568 897 Gene3D Transferase(Phosphotransferase) domain 1 616 830 - -
Sed14g0568 897 Pfam Malectin-like domain 42 413 IPR024788 -
Sed14g0568 897 ProSiteProfiles Protein kinase domain profile. 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0568 897 Gene3D Phosphorylase Kinase; domain 1 500 615 - -
Sed14g0568 897 CDD STKc_IRAK 545 811 - -
Sed14g0568 897 FunFam FERONIA receptor-like kinase 223 414 - -
Sed14g0568 897 Gene3D - 39 198 - -
Sed14g0568 897 Gene3D - 224 414 - -
Sed14g0568 897 FunFam Receptor-like protein kinase FERONIA 511 615 - -
Sed14g0568 897 SMART serkin_6 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed14g0568 897 MobiDBLite consensus disorder prediction 422 446 - -
Sed14g0568 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed14g0568 897 PANTHER OS03G0124300 PROTEIN-RELATED 14 477 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Sed14g0568 897 MobiDBLite consensus disorder prediction 853 890 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed06g1452 Sed-Chr6:39308276 Sed14g0568 Sed-Chr14:5681470 5.60E-86 dispersed
Sed06g1453 Sed-Chr6:39312243 Sed14g0568 Sed-Chr14:5681470 5.80E-154 dispersed
Sed09g1631 Sed-Chr9:39775066 Sed14g0568 Sed-Chr14:5681470 4.00E-68 dispersed
Sed10g0055 Sed-Chr10:354381 Sed14g0568 Sed-Chr14:5681470 2.30E-171 dispersed
Sed11g0218 Sed-Chr11:1995323 Sed14g0568 Sed-Chr14:5681470 3.30E-229 dispersed
Sed11g0219 Sed-Chr11:1995323 Sed14g0568 Sed-Chr14:5681470 7.80E-199 dispersed
Sed12g1972 Sed-Chr12:30709941 Sed14g0568 Sed-Chr14:5681470 8.00E-167 dispersed
Sed14g0568 Sed-Chr14:5681470 Sed03g0302 Sed-Chr3:1832095 8.60E-63 dispersed
Sed14g0568 Sed-Chr14:5681470 Sed02g0147 Sed-Chr2:31344702 9.50E-62 wgd
Sed14g0568 Sed-Chr14:5681470 Sed03g2427 Sed-Chr3:21120758 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80154 PF12819 Malectin_like 1.70E-39 CL0202 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed14g0568 - - - 0.0